RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ZNF280AP59817 542 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 FOXK1P85037 733 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SERINC3Q13530 473 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PTGR1Q14914 329 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PAFAH1B3Q15102 231 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 FBXL22Q6P050 247 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 KCTD18Q6PI47 426 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 TMIGD1Q6UXZ0 262 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TMEM110Q86TL2 294 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF598Q86UK7 904 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 AQP11Q8NBQ7 271 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SMG8Q8ND04 991 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 FKBP10Q96AY3 582 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LRIG1Q96JA1 1093 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GAL3ST1Q99999 423 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 YIPF4Q9BSR8 244 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GTPBP2Q9BX10 602 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 LRRN3Q9H3W5 708 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ACSS2Q9NR19 701 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NLE1Q9NVX2 485 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 TAS2R9Q9NYW1 312 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PADI2Q9Y2J8 665 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LRRC42Q9Y546 428 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF487B1APH4 448 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 M0R036 132 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 CAPN5O15484 640 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 RNF13O43567 381 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PPM1BO75688 479 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 APBB3O95704 486 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 IFNA1P01562 189 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 CSN2P05814 226 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 MPC1LP0DKB6 136 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HOXD8P13378 290 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 PTGS2P35354 604 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 RBMXP38159 391 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 CRISP1P54107 249 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 DEFA5Q01523 94 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GRK1Q15835 563 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TSTQ16762 297 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 AAK1Q2M2I8 961 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 C2orf27AQ580R0 203 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ANKRD26P1Q6NSI1 321 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PGM2L1Q6PCE3 622 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LRRN1Q6UXK5 716 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF572Q7Z3I7 529 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 C16orf58Q96GQ5 468 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HSH2DQ96JZ2 352 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HBEGFQ99075 208 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NAA11Q9BSU3 229 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 FUZQ9BT04 418 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TMED9Q9BVK6 235 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 CD244Q9BZW8 370 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SLC22A14Q9Y267 594 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ATRNL1Q5VV63 1379 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NFAT5O94916 1531 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 A0A0G2JMP0 313 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ANKRD66B4E2M5 251 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NPIPA2E9PIF3 369 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NPIPA3F8WFD2 350 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PHYHO14832 338 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SOCS5O75159 536 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 VNN1O95497 513 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 AK1P00568 194 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 FESP07332 822 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 JMJD7P0C870 316 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 EFNA1P20827 205 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 S1PR1P21453 382 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GSTM2P28161 218 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 DNAJB13P59910 316 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 RPS3AP61247 264 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 SLC3A1Q07837 685 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SH3PXD2AQ5TCZ1 1133 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LIPJQ5W064 366 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NOXRED1Q6NXP6 359 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ARSKQ6UWY0 536 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 UTS2BQ765I0 119 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF367Q7RTV3 350 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 IRF2BP1Q8IU81 584 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF440Q8IYI8 595 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 FTMTQ8N4E7 242 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 OR4M2Q8NGB6 313 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 OR5AK3PQ8NH89 298 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SLC35B2Q8TB61 432 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SCGB1C1Q8TD33 95 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TSPEARQ8WU66 669 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 KLHDC7BQ96G42 594 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 BMFQ96LC9 184 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TMEM68Q96MH6 324 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TSGA13Q96PP4 275 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 DNAJC5Q9H3Z4 198 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 PLCL2Q9UPR0 1127 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 SPEF1Q9Y4P9 236 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 FXYD6-FXYD2A0A087WZ82 144 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 A0A1W2PPL8 197 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 LCHNA4D1U4 455 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 DLGAP1O14490 977 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TSPAN4O14817 238 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 FLRT2O43155 660 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 VNN2O95498 520 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms