RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ANKRD28O15084 1053 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CD3GP09693 182 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 H2BFMP0C1H6 154 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF267Q14586 743 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-201ENST00000356083 MBLAC2Q68D91 279 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 TRPM1Q7Z4N2 1603 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 PROM1O43490 865 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CD79AP11912 226 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CD36P16671 472 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ENGP17813 658 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 MAGEA6P43360 314 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 FMO1Q01740 532 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 KLF10Q13118 480 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 FAM86B1Q8N7N1 296 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 WDR18Q9BV38 432 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF355PQ9NSJ1 428 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 POFUT2Q9Y2G5 429 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 PLLPQ9Y342 182 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 WNT6Q9Y6F9 365 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 SSX4O60224 188 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 NIPSNAP2O75323 286 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 GRIA1P42261 906 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 DSTNP60981 165 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
COL27A1-201ENST00000356083 DUS1LQ6P1R4 473 aaKnown RBP16.73■□□□□ 0.27
COL27A1-201ENST00000356083 PLD4Q96BZ4 506 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ARL8BQ9NVJ2 186 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 TET3O43151 1660 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 RHOQP17081 205 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 GRM5P41594 1212 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 HMGCS1Q01581 520 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 PRKCZQ05513 592 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF542PQ5EBM4 170 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 MBOAT1Q6ZNC8 495 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 SLC32A1Q9H598 525 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 LRRC4CQ9HCJ2 640 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 RAB26Q9ULW5 256 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CST3P01034 146 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-201ENST00000356083 SMSP52788 366 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 RPA4Q13156 261 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CLEC3BP05452 202 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 NUDT6P53370 316 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 PSMA6P60900 246 aaKnown RBP16.73■□□□□ 0.27
COL27A1-201ENST00000356083 KLHDC7BQ96G42 594 aa16.73■□□□□ 0.27
COL27A1-201ENST00000356083 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 GRPRP30550 384 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 PMS2P3Q13401 168 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 CCDC58Q4VC31 144 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 FUKQ8N0W3 1084 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 ZDHHC12Q96GR4 267 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 VPS29Q9UBQ0 182 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 ACAD8Q9UKU7 415 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 BPGMP07738 259 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SPTBP11277 2137 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 BDKRB1P46663 353 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 TAF1AQ15573 450 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-201ENST00000356083 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 CFAP77Q6ZQR2 320 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 DBF4BQ8NFT6 615 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SNX27Q96L92 541 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 OR5B12Q96R08 314 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 ZNF442Q9H7R0 627 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 B3GNT2Q9NY97 397 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 ACTR10Q9NZ32 417 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 B4GALT7Q9UBV7 327 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SLC9A3P48764 834 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 AIF1P55008 147 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 LRRN4CLQ8ND94 238 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 MAP3K3Q99759 626 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
COL27A1-201ENST00000356083 RAB11FIP5Q9BXF6 653 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SUV39H2Q9H5I1 410 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 TCRBV21S2A2A0A5A6 115 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SLC6A4P31645 630 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SMYD5Q6GMV2 418 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 HRASLS2Q9NWW9 162 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 RPH3ALQ9UNE2 315 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 ZFR2Q9UPR6 939 aaKnown RBP16.72■□□□□ 0.27
COL27A1-201ENST00000356083 PRORSD1PA6NEY8 169 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 K7EPI3 171 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 WDPCPO95876 746 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 GTF2F2P13984 249 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 AMY2BP19961 511 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 TBRG1Q3YBR2 411 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 GALNT15Q8N3T1 639 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 OR10G2Q8NGC3 310 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 PGAM5Q96HS1 289 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 RBP7Q96R05 134 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 TAS2R1Q9NYW7 299 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 AOC1P19801 751 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SLC15A1P46059 708 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 NFATC4Q14934 902 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 PON3Q15166 354 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 FRZBQ92765 325 aa16.72■□□□□ 0.27
COL27A1-201ENST00000356083 SLC1A7O00341 560 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms