RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 AP1S3Q96PC3 154 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CORO1BQ9BR76 489 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CEPT1Q9Y6K0 416 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CELP19835 753 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CILP2Q8IUL8 1156 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 MFSD8Q8NHS3 518 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CLEC4CQ8WTT0 213 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 RBM18Q96H35 190 aaKnown RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 FBXL18Q96ME1 805 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR4K3Q96R72 315 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 GTF2IRD1Q9UHL9 959 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 WNT9AO14904 365 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PAK4O96013 591 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 IFNA2P01563 188 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 HTR1AP08908 422 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 DCKP27707 260 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLBPQ14493 270 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SPRED3Q2MJR0 410 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 C6orf136Q5SQH8 315 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMEM220Q6QAJ8 160 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 DGLUCYQ7Z3D6 616 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 TSPYL5Q86VY4 417 aaPredicted RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHCHD4Q8N4Q1 142 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 GPR151Q8TDV0 419 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PLD4Q96BZ4 506 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 TXLNGYQ9BZA5 131 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 RNF121Q9H920 327 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PCDHB16Q9NRJ7 776 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 GNG8Q9UK08 70 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 IL32P24001 234 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 S100PP25815 95 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PLA2G16P53816 162 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 LILRA4P59901 499 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SNRPD2P62316 118 aaKnown RBP12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 OGDHQ02218 1023 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 SOWAHAQ2M3V2 549 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 RASGEF1AQ8N9B8 481 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCNA7Q96RP8 456 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 PTPN18Q99952 460 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 ENPP5Q9UJA9 477 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMEM5Q9Y2B1 443 aa12.32□□□□□ -0.44
SYNCRIP-201ENST00000355238 B8ZZF3 427 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 FAAHO00519 579 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RFPL3O75679 317 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMCO2Q7Z6W1 182 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR8J1Q8NGP2 316 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 NRG4Q8WWG1 115 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMIGD2Q96BF3 282 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 SH3YL1Q96HL8 342 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RIPOR3Q96MK2 946 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZFR2Q9UPR6 939 aaKnown RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 IRAK2O43187 625 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 LRRTM2O43300 516 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 B3GALT2O43825 422 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 BCAS1O75363 584 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CH25HO95992 272 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 ALDOAP04075 364 aaKnown RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 NR4A2P43354 598 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CLCN7P51798 805 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 C1QTNF8P60827 252 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 DESI1Q6ICB0 168 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 REEP3Q6NUK4 255 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCNN1Q92952 543 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RAB11FIP5Q9BXF6 653 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 POTEKPQ9BYX7 375 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC2A6Q9UGQ3 507 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 UQCRC1P31930 480 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 DUSP4Q13115 394 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CCDC58Q4VC31 144 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 C22orf42Q6IC83 251 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF101Q8IZC7 436 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 JAGN1Q8N5M9 183 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RGMAQ96B86 450 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 NELL2Q99435 816 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 DOHHQ9BU89 302 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 ADAM7Q9H2U9 754 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 QPCTLQ9NXS2 382 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMEM181Q9P2C4 612 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CD84Q9UIB8 345 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RPP14O95059 124 aaKnown RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRNPP04156 253 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 STSP08842 583 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CKMT1AP12532 417 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CD52P31358 61 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms