RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ADAMTS18Q8TE60 1221 aa14.9□□□□□ -0.02
PDGFA-201ENST00000354513 THAP3Q8WTV1 239 aaPredicted RBP14.9□□□□□ -0.02
PDGFA-201ENST00000354513 ZNF592Q92610 1267 aa14.9□□□□□ -0.02
PDGFA-201ENST00000354513 TRIM8Q9BZR9 551 aa14.9□□□□□ -0.02
PDGFA-201ENST00000354513 SUCOQ9UBS9 1254 aaKnown RBP14.9□□□□□ -0.02
PDGFA-201ENST00000354513 ESPNB1AK53 854 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 CHST10O43529 356 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 FHP07954 510 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 ZNF888P0CJ79 500 aaPredicted RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 TCP1P17987 556 aaKnown RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 IVDP26440 423 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 FNTAP49354 379 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 CCR8P51685 355 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 NSDHLQ15738 373 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 PPP1R3AQ16821 1122 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 DEFB134Q4QY38 66 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 SPANXN3Q5MJ09 141 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 TRMT10BQ6PF06 316 aaKnown RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 RPTNQ6XPR3 784 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 GALNTL5Q7Z4T8 443 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 GALNT7Q86SF2 657 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 ANKRD53Q8N9V6 530 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 NFAM1Q8NET5 270 aaPredicted RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 ACTRT1Q8TDG2 376 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 UTP15Q8TED0 518 aaKnown RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 NEIL2Q969S2 332 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 FBXL8Q96CD0 374 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 CERS2Q96G23 380 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 SNF8Q96H20 258 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 PWWP2AQ96N64 755 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 LPAR4Q99677 370 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 UTP23Q9BRU9 249 aaKnown RBP14.89□□□□□ -0.03
PDGFA-201ENST00000354513 FAM129AQ9BZQ8 928 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 SAR1BQ9Y6B6 198 aa14.89□□□□□ -0.03
PDGFA-201ENST00000354513 PKDREJQ9NTG1 2253 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 IGKV3D-11A0A0A0MRZ8 115 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 FAM227AF5H4B4 570 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 TTI1O43156 1089 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 OR1F1O43749 312 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 ALOX12P18054 663 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 IL10P22301 178 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 TPP2P29144 1249 aaPredicted RBP14.88□□□□□ -0.03
PDGFA-201ENST00000354513 SCTRP47872 440 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 OR4D2P58180 307 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 BTG2P78543 158 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 HSF1Q00613 529 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 REEP5Q00765 189 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 PWP1Q13610 501 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 HERC3Q15034 1050 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 HECTD2Q5U5R9 776 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 STRA8Q7Z7C7 330 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 LGI4Q8N135 537 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 TBC1D20Q96BZ9 403 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 TRIM51Q9BSJ1 452 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 HAUS8Q9BT25 410 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 SLC6A16Q9GZN6 736 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 KLHL31Q9H511 634 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 CDCP1Q9H5V8 836 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 ARL15Q9NXU5 204 aa14.88□□□□□ -0.03
PDGFA-201ENST00000354513 NPIPA5E9PKD4 350 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 CES2O00748 559 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 SP1P08047 785 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 SNRPB2P08579 225 aaKnown RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 ELAVL4P26378 380 aaKnown RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 EEF1DP29692 281 aaKnown RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 PTGER4P35408 488 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 GRK3P35626 688 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 AP1S2P56377 157 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 ALDH6A1Q02252 535 aaKnown RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 RBPJQ06330 500 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 QSOX2Q6ZRP7 698 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 KIAA0408Q6ZU52 694 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 SPPL2CQ8IUH8 684 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 SLC5A8Q8N695 610 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 GRK7Q8WTQ7 553 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 SLC5A11Q8WWX8 675 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 TSNARE1Q96NA8 513 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 DDX47Q9H0S4 455 aaKnown RBP14.87□□□□□ -0.03
PDGFA-201ENST00000354513 NECTIN3Q9NQS3 549 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 NPIPA1Q9UND3 350 aa14.87□□□□□ -0.03
PDGFA-201ENST00000354513 PHF3Q92576 2039 aaKnown RBP14.86□□□□□ -0.03
PDGFA-201ENST00000354513 TCRBV16S1A1N1A0A5B0 115 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 SAGE2PA6NJ88 616 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 ADAM10O14672 748 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 ZNF500O60304 480 aaPredicted RBP14.86□□□□□ -0.03
PDGFA-201ENST00000354513 NME2P1O60361 137 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 B4GALT2O60909 372 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 TTC4O95801 387 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 GUCA1CO95843 209 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 CD46P15529 392 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 MAOAP21397 527 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 NME2P22392 152 aa14.86□□□□□ -0.03
PDGFA-201ENST00000354513 IL2P60568 153 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms