RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 IL1RNP18510 177 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 PIK3CBP42338 1070 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 RAB8AP61006 207 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 RPS13P62277 151 aaKnown RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 NDUFA9Q16795 377 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 CACNA2D3Q8IZS8 1091 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 OR9A4Q8NGU2 314 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 UTP15Q8TED0 518 aaKnown RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 MS4A6EQ96DS6 147 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 HBEGFQ99075 208 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 MS4A8Q9BY19 250 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 C20orf27Q9GZN8 174 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ELOVL6Q9H5J4 265 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 DMRT3Q9NQL9 472 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 PADI1Q9ULC6 663 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 MANBAO00462 879 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 PDYNP01213 254 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ENO1P06733 434 aaKnown RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 KLK3P07288 261 aaPredicted RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 CHN1P15882 459 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SERPINB3P29508 390 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 HTR6P50406 440 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ABHD18Q0P651 414 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 IFT88Q13099 833 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 FAM53BQ14153 422 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 MAP7Q14244 749 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SLC9A5Q14940 896 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ADPRMQ3LIE5 342 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 CLEC6AQ6EIG7 209 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ZNF517Q6ZMY9 492 aaPredicted RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 PDSS2Q86YH6 399 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SHISA5Q8N114 240 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ESX1Q8N693 406 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 PROKR1Q8TCW9 393 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 MR1Q95460 341 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 REXO4Q9GZR2 422 aaKnown RBP21.05■□□□□ 0.96
SHMT1-203ENST00000354098 CHST8Q9H2A9 424 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 OR51B5Q9H339 312 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SLC22A11Q9NSA0 550 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 WDR70Q9NW82 654 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 ADGRE2Q9UHX3 823 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SNX6Q9UNH7 406 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 SLC22A7Q9Y694 548 aa21.05■□□□□ 0.96
SHMT1-203ENST00000354098 A0A0G2JN53 185 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SAP18O00422 153 aaKnown RBP21.04■□□□□ 0.96
SHMT1-203ENST00000354098 ETHE1O95571 254 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 CCNYL3P0C7X3 344 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SMIM10L1P0DMW3 83 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 NR1D1P20393 614 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 HMOX2P30519 316 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SERPINB1P30740 379 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 STXBP1P61764 594 aaKnown RBP21.04■□□□□ 0.96
SHMT1-203ENST00000354098 DCDP81605 110 aaKnown RBP21.04■□□□□ 0.96
SHMT1-203ENST00000354098 CLN3Q13286 438 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 DEFB134Q4QY38 66 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 HSP90B2PQ58FF3 399 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 AFAP1L2Q8N4X5 818 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SNIP1Q8TAD8 396 aaKnown RBP21.04■□□□□ 0.96
SHMT1-203ENST00000354098 AGR3Q8TD06 166 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SELENOMQ8WWX9 145 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SMIM10Q96HG1 83 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 SLC29A3Q9BZD2 475 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 NAALAD2Q9Y3Q0 740 aa21.04■□□□□ 0.96
SHMT1-203ENST00000354098 FOXE1O00358 373 aaPredicted RBP21.03■□□□□ 0.96
SHMT1-203ENST00000354098 ALOX12P18054 663 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 SERPINB5P36952 375 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 PLA2G16P53816 162 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 ABCE1P61221 599 aaKnown RBP21.03■□□□□ 0.96
SHMT1-203ENST00000354098 GALNT1Q10472 559 aaPredicted RBP21.03■□□□□ 0.96
SHMT1-203ENST00000354098 NKAIN1Q4KMZ8 207 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 SCIMPQ6UWF3 145 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 MMABQ96EY8 250 aaPredicted RBP21.03■□□□□ 0.96
SHMT1-203ENST00000354098 CMTM7Q96FZ5 175 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 EML4Q9HC35 981 aaKnown RBP21.03■□□□□ 0.96
SHMT1-203ENST00000354098 MED4Q9NPJ6 270 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 FIS1Q9Y3D6 152 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 CHD8Q9HCK8 2581 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 AHCTF1Q8WYP5 2266 aa21.03■□□□□ 0.96
SHMT1-203ENST00000354098 LOC101059948A0A1B0GTJ6 334 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 URADA6NGE7 173 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 TMEM233B4DJY2 109 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 SGK494L7N484 410 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 TAF4O00268 1085 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ERI3O43414 337 aaKnown RBP21.02■□□□□ 0.96
SHMT1-203ENST00000354098 DNAJB6O75190 326 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 KRT6AP02538 564 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 KRT6BP04259 564 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 GRK2P25098 689 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 STAT5AP42229 794 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 KRT6CP48668 564 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 FOXK2Q01167 660 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 BST1Q10588 318 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 STX3Q13277 289 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ABRAXAS2Q15018 415 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 DEPDC1Q5TB30 811 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 KHDRBS2Q5VWX1 349 aaKnown RBP21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ABHD13Q7L211 337 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 UBE3DQ7Z6J8 389 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 IL22RA1Q8N6P7 574 aa21.02■□□□□ 0.96
SHMT1-203ENST00000354098 ZNF248Q8NDW4 579 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms