RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KIAA1211LQ6NV74 962 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 OR14C36Q8NHC7 312 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 ASPSCR1Q9BZE9 553 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 RBM38Q9H0Z9 239 aaKnown RBP16■□□□□ 0.15
SAMM50-201ENST00000350028 IL1RAPQ9NPH3 570 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 SPASTQ9UBP0 616 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 COLQQ9Y215 455 aaPredicted RBP16■□□□□ 0.15
SAMM50-201ENST00000350028 DMTF1Q9Y222 760 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 SLC17A4Q9Y2C5 497 aa16■□□□□ 0.15
SAMM50-201ENST00000350028 MAGED1Q9Y5V3 778 aaPredicted RBP16■□□□□ 0.15
SAMM50-201ENST00000350028 E2F6O75461 281 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SEC24DO94855 1032 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 CLIC3O95833 236 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 GBAP04062 536 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PCGF2P35227 344 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 IST1P53990 364 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SH3BGRP55822 239 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 ZIK1Q3SY52 487 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 TMEM196Q5HYL7 178 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 IER5LQ5T953 404 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SPESP1Q6UW49 350 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 OR4K1Q8NGD4 311 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PNPT1Q8TCS8 783 aaKnown RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 ADAMTS16Q8TE57 1224 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 C12orf66Q96MD2 445 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 INSM2Q96T92 566 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SMURF2Q9HAU4 748 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 TM9SF3Q9HD45 589 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 LMCD1Q9NZU5 365 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 A0A1W2PPV9 198 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 VILLO15195 856 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 FUCA1P04066 466 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SEMG1P04279 462 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 CEACAM5P06731 702 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 RPL10P27635 214 aaKnown RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 MC1RQ01726 317 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 GAB1Q13480 694 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 TEAD4Q15561 434 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 RFX4Q33E94 735 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 CCNYL2Q5T2Q4 361 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 KHDRBS2Q5VWX1 349 aaKnown RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PAGE2Q7Z2X7 111 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 HORMAD1Q86X24 394 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 OFCC1Q8IZS5 231 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 GALNT15Q8N3T1 639 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 NATD1Q8N6N6 113 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 C11orf65Q8NCR3 313 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 ZNF555Q8NEP9 628 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 ASB12Q8WXK4 309 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 CAMK1GQ96NX5 476 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 QRFPRQ96P65 431 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 DPH2Q9BQC3 489 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 APOOQ9BUR5 198 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 RAB11FIP5Q9BXF6 653 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 MS4A8Q9BY19 250 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 MKRN2Q9H000 416 aaKnown RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 BTBD1Q9H0C5 482 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 TOR3AQ9H497 397 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 RAD21L1Q9H4I0 556 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SOX17Q9H6I2 414 aaPredicted RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PREBQ9HCU5 417 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PAPOLBQ9NRJ5 636 aaKnown RBP15.99■□□□□ 0.15
SAMM50-201ENST00000350028 BAG5Q9UL15 447 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
SAMM50-201ENST00000350028 PRR23AA6NEV1 266 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 TBX19O60806 448 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 C6orf47O95873 294 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 FABP3P05413 133 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 DDX5P17844 614 aaKnown RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 TPP2P29144 1249 aaPredicted RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 IGFALSP35858 605 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 HBA1P69905 142 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 RBBP4Q09028 425 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 OR2T5Q6IEZ7 315 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 DUS1LQ6P1R4 473 aaKnown RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 SHQ1Q6PI26 577 aaKnown RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 TMEM26Q6ZUK4 368 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 TMEM179BQ7Z7N9 219 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 OR52N2Q8NGI0 321 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 OR2T29Q8NH02 315 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 ZFAND2BQ8WV99 257 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 MUS81Q96NY9 551 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 OSGEPL1Q9H4B0 414 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 CUEDC1Q9NWM3 386 aaPredicted RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 FAM118AQ9NWS6 357 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 C3orf18Q9UK00 162 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 FAF1Q9UNN5 650 aaPredicted RBP15.98■□□□□ 0.15
SAMM50-201ENST00000350028 WDR37Q9Y2I8 494 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 TICRRQ7Z2Z1 1910 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 NUMA1Q14980 2115 aa15.98■□□□□ 0.15
SAMM50-201ENST00000350028 PRUNE2Q8WUY3 3088 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 NUP214P35658 2090 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 A0A1W2PRB8 838 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ENO4A6NNW6 628 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 CACNB4O00305 520 aaPredicted RBP15.97■□□□□ 0.15
SAMM50-201ENST00000350028 NTRK1P04629 796 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 IL3P08700 152 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 GSTM5P46439 218 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 ARHGDIAP52565 204 aa15.97■□□□□ 0.15
SAMM50-201ENST00000350028 RAD23AP54725 363 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms