RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SEC16BQ96JE7 1060 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 MARK4Q96L34 752 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 ZNF717Q9BY31 904 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 RIC8BQ9NVN3 520 aa18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 G3BP2Q9UN86 482 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 RUVBL1Q9Y265 456 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-201ENST00000347519 TMEM150CB9EJG8 249 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 PLPP1O14494 284 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 LBPP18428 481 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 RPL38P63173 70 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 RAE1P78406 368 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 TRA2AQ13595 282 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 CUL3Q13618 768 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 RIPOR1Q6ZS17 1223 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 ACAD11Q709F0 780 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 ZFAND4Q86XD8 727 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 DTWD1Q8N5C7 304 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 C1orf52Q8N6N3 182 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 CAMKVQ8NCB2 501 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 ZCCHC10Q8TBK6 192 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 UTP15Q8TED0 518 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 ZNF501Q96CX3 271 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 RNF31Q96EP0 1072 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 C11orf24Q96F05 449 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 SLC45A3Q96JT2 553 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 PPP3R2Q96LZ3 170 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 RILPQ96NA2 401 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 C1orf50Q9BV19 199 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 PFDN4Q9NQP4 134 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 C1orf109Q9NX04 203 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 HEY2Q9UBP5 337 aa18.09■□□□□ 0.49
CHMP4A-201ENST00000347519 SRPX2O60687 465 aaPredicted RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 VPS4BO75351 444 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 SEC22BO75396 215 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 MT-CO3P00414 261 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 ZNF888P0CJ79 500 aaPredicted RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 SMIM10L1P0DMW3 83 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 SDHBP21912 280 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 CCKBRP32239 447 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 BSGP35613 385 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 PLA2G16P53816 162 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 RAB8AP61006 207 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 SIM1P81133 766 aaPredicted RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 RGS1Q08116 209 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 ATP6AP1LQ52LC2 224 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 TMTC4Q5T4D3 741 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 GKAP1Q5VSY0 366 aaPredicted RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 PRAMEF17Q5VTA0 474 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 HOMEZQ8IX15 550 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 METTL4Q8N3J2 472 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 CEP70Q8NHQ1 597 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 SMIM10Q96HG1 83 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 FCRL1Q96LA6 429 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 TMEM74Q96NL1 305 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 REXO4Q9GZR2 422 aaKnown RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 FGF21Q9NSA1 209 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 DLGAP4Q9Y2H0 992 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 ARL2BPQ9Y2Y0 163 aa18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 POLR3HQ9Y535 204 aaPredicted RBP18.08■□□□□ 0.49
CHMP4A-201ENST00000347519 MAP3K7O43318 606 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 ERI3O43414 337 aaKnown RBP18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 EEDO75530 441 aaKnown RBP18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 GBAP04062 536 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 SLC35G6P0C7Q6 338 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 MSL3P1P0C860 447 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 CCL4P13236 92 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 DIO3P55073 304 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 PUM1Q14671 1186 aaKnown RBP eCLIP18.07■□□□□ 0.489e-8■□□□□ 9.5
CHMP4A-201ENST00000347519 ISXQ2M1V0 245 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 HES3Q5TGS1 186 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 OGFOD2Q6N063 350 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 TMEM214Q6NUQ4 689 aaKnown RBP18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 ABHD17CQ6PCB6 329 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 ZNF793Q6ZN11 406 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 CHSY3Q70JA7 882 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 PRSS41Q7RTY9 318 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 COMMD6Q7Z4G1 85 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 SHISA5Q8N114 240 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 BMPERQ8N8U9 685 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 FNDC5Q8NAU1 212 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 C10orf90Q96M02 699 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 CATSPER2Q96P56 530 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 QRFPRQ96P65 431 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 TEFMQ96QE5 360 aaKnown RBP18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 C17orf62Q9BQA9 187 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 EBPLQ9BY08 206 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 APMAPQ9HDC9 416 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 PRDM7Q9NQW5 492 aa18.07■□□□□ 0.48
CHMP4A-201ENST00000347519 PMS2P1A4D2B8 440 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 EFCAB7A8K855 629 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 DNAJB6O75190 326 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 CSO75390 466 aaKnown RBP18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 SEMA3DO95025 777 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 NOVA1P51513 510 aaKnown RBP18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 ERVK-8P63133 956 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 EMX2Q04743 252 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 TMEM35AQ53FP2 167 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 IL23RQ5VWK5 629 aa18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 ZNF655Q8N720 491 aaPredicted RBP18.06■□□□□ 0.48
CHMP4A-201ENST00000347519 CCDC197Q8NCU1 140 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms