RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GLRBP48167 497 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 PIK3CGP48736 1102 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 C18orf21Q32NC0 220 aaPredicted RBP14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 TOR1AIP1Q5JTV8 583 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 LAPTM4BQ86VI4 370 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 UHMK1Q8TAS1 419 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 THOC3Q96J01 351 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 SCYL1Q96KG9 808 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 ATOH8Q96SQ7 321 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 ZNF160Q9HCG1 818 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 IGSF5Q9NSI5 407 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 TMCO1Q9UM00 188 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 ZNF462Q96JM2 2506 aa14.92□□□□□ -0.02
TSPAN4-201ENST00000346501 K7EM74 188 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 UBXN8O00124 270 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 CLEC3AO75596 197 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 WFS1O76024 890 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 COL6A2P12110 1019 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ECHS1P30084 290 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 SERPINB1P30740 379 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 RAB8AP61006 207 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ACTN3Q08043 901 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 CHIT1Q13231 466 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 RCN2Q14257 317 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 TRIM40Q6P9F5 258 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 PRSS41Q7RTY9 318 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ATCAYQ86WG3 371 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 EIF1ADQ8N9N8 165 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ANKRD53Q8N9V6 530 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 SRFBP1Q8NEF9 429 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ARMC2Q8NEN0 867 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 GAL3ST3Q96A11 431 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ESAMQ96AP7 390 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 C8orf44Q96CB5 159 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 MTBPQ96DY7 904 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 PEX11GQ96HA9 241 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 CENPKQ9BS16 269 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 TUBB6Q9BUF5 446 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 TRIM4Q9C037 500 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 SLC6A16Q9GZN6 736 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 EPN3Q9H201 632 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 COPS7BQ9H9Q2 264 aaPredicted RBP14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 CPSF2Q9P2I0 782 aaKnown RBP14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 MED13Q9UHV7 2174 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 ATMQ13315 3056 aa14.91□□□□□ -0.02
TSPAN4-201ENST00000346501 IQANK1A0A1B0GTG1 560 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ZNF860A6NHJ4 632 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 SMIM24O75264 130 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ALDOAP04075 364 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 PDGFAP04085 211 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 RNH1P13489 461 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ARL1P40616 181 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 CSRP3P50461 194 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ALDH18A1P54886 795 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 PHEXP78562 749 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 IRF9Q00978 393 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 KCNC4Q03721 635 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 EEF1A2Q05639 463 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 DLG1Q12959 904 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 DOC2AQ14183 400 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 TBCCQ15814 346 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 PFKFB4Q16877 469 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 FBXO48Q5FWF7 155 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 METTL2BQ6P1Q9 378 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 RIPOR1Q6ZS17 1223 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 MYLK4Q86YV6 388 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■■■■■ 92.8
TSPAN4-201ENST00000346501 CENPLQ8N0S6 344 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 AFAP1L2Q8N4X5 818 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 UTP15Q8TED0 518 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 UBTD2Q8WUN7 234 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 TBC1D20Q96BZ9 403 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ROGDIQ9GZN7 287 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 VN1R1Q9GZP7 353 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ILKAPQ9H0C8 392 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 SPNS1Q9H2V7 528 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ZNF552Q9H707 407 aaPredicted RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 ADGRE2Q9UHX3 823 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 TEKT2Q9UIF3 430 aa14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 MRPS33Q9Y291 106 aaKnown RBP14.9□□□□□ -0.02
TSPAN4-201ENST00000346501 LOC102723996A0A087X1L8 192 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 IGHV1-45A0A0A0MS14 117 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 TRIM49D1C9J1S8 452 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 RIPK2O43353 540 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 ERI3O43414 337 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 CHST10O43529 356 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 B3GALT2O43825 422 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 WISP1O95388 367 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 SERPINA7P05543 415 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 FHP07954 510 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 MYBL2P10244 700 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 BTN3A2P78410 334 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 SETDB1Q15047 1291 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 NSDHLQ15738 373 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 JMJD6Q6NYC1 403 aaPredicted RBP14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 MED27Q6P2C8 311 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 TMEM205Q6UW68 189 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 IGFL3Q6UXB1 125 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms