RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 NDUFV2P19404 249 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 RPL3P39023 403 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CLCN2P51788 898 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 HBA1P69905 142 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SLC36A3Q495N2 470 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ERICH5Q6P6B1 374 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR2A1Q8NGT9 310 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ABHD8Q96I13 439 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MS4A8Q9BY19 250 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ZNF282Q9UDV7 671 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CA5BQ9Y2D0 317 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MAGED1Q9Y5V3 778 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 DNAH14Q0VDD8 3507 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PRAMEF33A0A0G2JMD5 474 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 RTCAO00442 366 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR1F1O43749 312 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SEMA3DO95025 777 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ZNF682O95780 498 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PPIBP23284 216 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PKLRP30613 574 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 BMP8BP34820 402 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 IST1P53990 364 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ARSFP54793 590 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 VAC14Q08AM6 782 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 RGNQ15493 299 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MPEG1Q2M385 716 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 TMEM31Q5JXX7 168 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CCNYL2Q5T2Q4 361 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ADCK2Q7Z695 626 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 EID3Q8N140 333 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR52E1Q8NGJ3 308 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR2L8Q8NGY9 312 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CYGBQ8WWM9 190 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MTERF3Q96E29 417 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ZNF717Q9BY31 904 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PITHD1Q9GZP4 211 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MVB12BQ9H7P6 319 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SAMD4AQ9UPU9 718 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CORO2BQ9UQ03 480 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 GMEB1Q9Y692 573 aa13.51□□□□□ -0.25
CDK5RAP1-202ENST00000346416 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 GNGT2O14610 69 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 GPR37L1O60883 481 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SNAP29O95721 258 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 C6orf47O95873 294 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CLPTM1O96005 669 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 NUDT7P0C024 238 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 KDELR2P33947 212 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 TPMTP51580 245 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 TCEA2Q15560 299 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 RPE65Q16518 533 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 LIN52Q52LA3 116 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CYBRD1Q53TN4 286 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 GALNT10Q86SR1 603 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 STK32CQ86UX6 486 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PLD3Q8IV08 490 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MMP21Q8N119 569 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PGBD3Q8N328 593 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 GOT1L1Q8NHS2 421 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PDXPQ96GD0 296 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR2M4Q96R27 311 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 TSC22D3Q99576 134 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 RAB11FIP5Q9BXF6 653 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 NT5DC2Q9H857 520 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SCHIP1Q9P0W5 487 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ICKQ9UPZ9 632 aa13.5□□□□□ -0.25
CDK5RAP1-202ENST00000346416 A0A1B0GTW7 788 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 G3V2T6 193 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ATP6V1B1P15313 513 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 HOXB6P17509 224 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 MYF6P23409 242 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SERPINB1P30740 379 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 BSGP35613 385 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 KIAA1024LP59773 190 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 PRSS53Q2L4Q9 553 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ENPP7Q6UWV6 458 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ANGPTL8Q6UXH0 198 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SYNPOQ8N3V7 929 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 ZCCHC7Q8N3Z6 543 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 DHRSXQ8N5I4 330 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 OR1E3Q8WZA6 343 aa13.49□□□□□ -0.25
CDK5RAP1-202ENST00000346416 SLC6A16Q9GZN6 736 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms