RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DOCK9Q9BZ29 2069 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 CCDC90BQ9GZT6 254 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 GPN2Q9H9Y4 310 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 PLGRKTQ9HBL7 147 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ERVK-18Q9QC07 812 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ACSL6Q9UKU0 697 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 TMEM98Q9Y2Y6 226 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 DYRK1BQ9Y463 629 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 HEPACAM2A8MVW5 462 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 LZTS3O60299 673 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ITIH1P19827 911 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 PCGF2P35227 344 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 CRATP43155 626 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 PNLIPRP1P54315 467 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 KEAP1Q14145 624 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 FAHD1Q6P587 224 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 NXPE4Q6UWF7 544 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ANGPTL8Q6UXH0 198 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 GOT1L1Q8NHS2 421 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 C16orf78Q8WTQ4 265 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 SLC5A11Q8WWX8 675 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 LINC00615Q96LM1 132 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 EFCAB11Q9BUY7 163 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 SORBS1Q9BX66 1292 aaKnown RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ASPSCR1Q9BZE9 553 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 BHLHE41Q9C0J9 482 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 REEP1Q9H902 201 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF282Q9UDV7 671 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 BAG5Q9UL15 447 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 PSME2Q9UL46 239 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 GMPPBQ9Y5P6 360 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 PRAMEF25A6NGN4 478 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 MAGEB3O15480 346 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SUV39H1O43463 412 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 TNFRSF21O75509 655 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 KLK1P06870 262 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SLC35A2P78381 396 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 DPTQ07507 201 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ELP6Q0PNE2 266 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 PDE7AQ13946 482 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF234Q14588 700 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SPCS2Q15005 226 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 FAM180BQ6P0A1 224 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF765Q7L2R6 523 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ATG16L2Q8NAA4 619 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 OR5AR1Q8NGP9 310 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 OR8D1Q8WZ84 308 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 REPS1Q96D71 796 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 MAGED4Q96JG8 741 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 DOHHQ9BU89 302 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SPATA9Q9BWV2 254 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ZCCHC2Q9C0B9 1178 aaKnown RBP14.81□□□□□ -0.04
UPF3B-202ENST00000345865 KRT84Q9NSB2 600 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 WARS2Q9UGM6 360 aaKnown RBP14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF451Q9Y4E5 1061 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 EDDM13A0A1B0GTR0 161 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 E9PQ18 207 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 NOL3O60936 208 aaKnown RBP14.81□□□□□ -0.04
UPF3B-202ENST00000345865 JUNDP17535 347 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 RRM2P31350 389 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 MAP2K4P45985 399 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 TAS2R50P59544 299 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 C2orf80Q0P641 193 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 ELAVL3Q14576 367 aaKnown RBP14.81□□□□□ -0.04
UPF3B-202ENST00000345865 FAM78AQ5JUQ0 283 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 FAM71E1Q6IPT2 247 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 TMC5Q6UXY8 1006 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 MMAAQ8IVH4 418 aaKnown RBP14.81□□□□□ -0.04
UPF3B-202ENST00000345865 C11orf65Q8NCR3 313 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 OR2L2Q8NH16 312 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 OR5AK3PQ8NH89 298 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SLC35A5Q9BS91 424 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 OR52A5Q9H2C5 316 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 TMEM245Q9H330 911 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 EHD1Q9H4M9 534 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 DUSP21Q9H596 190 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 GALNT8Q9NY28 637 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 NDUFAF4Q9P032 175 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SLC23A2Q9UGH3 650 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 PCDHGB1Q9Y5G3 927 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 PCDHGA10Q9Y5H3 936 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 SNX5Q9Y5X3 404 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 DGKBQ9Y6T7 804 aa14.81□□□□□ -0.04
UPF3B-202ENST00000345865 C17orf113A0A1B0GUU1 675 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 BCAS1O75363 584 aaPredicted RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 TBX6O95947 436 aaPredicted RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 C9P02748 559 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 PPIBP23284 216 aaKnown RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ACVR2AP27037 513 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 SELENOWP63302 87 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 Q6ZPB1 254 aaPredicted RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ADGRD2Q7Z7M1 963 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 METTL4Q8N3J2 472 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 SETD9Q8NE22 299 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 SMG7Q92540 1137 aaKnown RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 CXorf40BQ96DE9 158 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ACAT2Q9BWD1 397 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 CCDC177Q9NQR7 707 aaPredicted RBP14.8□□□□□ -0.04
UPF3B-202ENST00000345865 ITM2CQ9NQX7 267 aa14.8□□□□□ -0.04
UPF3B-202ENST00000345865 DEC1Q9P2X7 70 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms