RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SERPINA13PQ6UXR4 307 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 LINC00471Q8N535 108 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 ELMOD3Q96FG2 381 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SORT1Q99523 831 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 SLC29A3Q9BZD2 475 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
COL12A1-202ENST00000345356 NRCAMQ92823 1304 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 GRID2O43424 1007 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 ACSL4O60488 711 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 TACR2P21452 398 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 LRP8Q14114 963 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 NXPE1Q8N323 547 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 C1orf52Q8N6N3 182 aaKnown RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OR8K5Q8NH50 307 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF563Q8TA94 476 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 FERD3LQ96RJ6 166 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OR51I1Q9H343 314 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 MAGIXQ9H6Y5 334 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 NDOR1Q9UHB4 597 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 URADA6NGE7 173 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PAK4O96013 591 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF3P17036 446 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 EMX1Q04741 257 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 CBX2Q14781 532 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 XKR4Q5GH76 650 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 RHBDF1Q96CC6 855 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 SLC30A3Q99726 388 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OR51E2Q9H255 320 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 SH2B3Q9UQQ2 575 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 OR6C74A6NCV1 312 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PROM1O43490 865 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 RASGRP1O95267 797 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 SCGB1D2O95969 90 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 GINS1Q14691 196 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 ZDHHC20Q5W0Z9 365 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 SPATC1Q76KD6 591 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 YIPF7Q8N8F6 280 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 UROC1Q96N76 676 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 KCNH6Q9H252 994 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 MAGED1Q9Y5V3 778 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 MYH6P13533 1939 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 IRS2Q9Y4H2 1338 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 LCHNA4D1U4 455 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 CD8B2A6NJW9 211 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 F8W036 122 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 THEGLP0DJG4 465 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 CD8BP10966 210 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PIK3CBP42338 1070 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PAFAH1B3Q15102 231 aaKnown RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 GPRC6AQ5T6X5 926 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF772Q68DY9 489 aaPredicted RBP11.72□□□□□ -0.53
COL12A1-202ENST00000345356 GTF2IRD2BQ6EKJ0 949 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 GTF2IRD2Q86UP8 949 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 SLC32A1Q9H598 525 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 NTN4Q9HB63 628 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 RNF11Q9Y3C5 154 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 MED31Q9Y3C7 131 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHGA8Q9Y5G5 932 aa11.72□□□□□ -0.53
COL12A1-202ENST00000345356 HAS3O00219 553 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 MT-ND5P03915 603 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CAPNS1P04632 268 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CRHBPP24387 322 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SSTR4P31391 388 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 MLLT10P55197 1068 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CYS1Q717R9 158 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 ADGRG5Q8IZF4 528 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 OR10A4Q9H209 315 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 MRPL15Q9P015 296 aaKnown RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CD300AQ9UGN4 299 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 TCRBV3S1A0A5B6 114 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 ATP6V1G2-DDX39BF2Z307 99 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 G3V2L1 256 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 PRKYO43930 277 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 GATBO75879 557 aaKnown RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 RPP14O95059 124 aaKnown RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 TCEA2Q15560 299 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 COQ5Q5HYK3 327 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SLC39A4Q6P5W5 647 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 POMZP3Q6PJE2 187 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 KRTCAP2Q8N6L1 136 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 CXorf40AQ8TE69 158 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 PMM1Q92871 262 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 PEX13Q92968 403 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
COL12A1-202ENST00000345356 P2RX2Q9UBL9 471 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 KCTD3Q9Y597 815 aa11.71□□□□□ -0.53
COL12A1-202ENST00000345356 SLIT3O75094 1523 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms