RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LRGUKQ96M69 825 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
CDC42-202ENST00000344548 LRRC61Q9BV99 259 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 MUTYHQ9UIF7 546 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 AURKCQ9UQB9 309 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
CDC42-202ENST00000344548 A0A1W2PR77 199 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 TPST1O60507 370 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 PDGFBP01127 241 aaPredicted RBP12.96□□□□□ -0.33
CDC42-202ENST00000344548 POLR2CP19387 275 aaPredicted RBP12.96□□□□□ -0.33
CDC42-202ENST00000344548 CXCR2P25025 360 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 SLC7A1P30825 629 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 LSSP48449 732 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 PPP1CAP62136 330 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 TAF11Q15544 211 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 DUOXA1Q1HG43 343 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 ZFP1Q6P2D0 407 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 ZNF793Q6ZN11 406 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 PRR23BQ6ZRT6 265 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 ZNF621Q6ZSS3 439 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 ZNF438Q7Z4V0 828 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 SHISA5Q8N114 240 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 OR10G6Q8NH81 332 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 CLDN23Q96B33 292 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 DUS3LQ96G46 650 aaKnown RBP12.96□□□□□ -0.33
CDC42-202ENST00000344548 SHDQ96IW2 340 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 OR2A14Q96R47 310 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 TWSG1Q9GZX9 223 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 NT5DC2Q9H857 520 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 RMND5AQ9H871 391 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 OR6C2Q9NZP2 312 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 MCM8Q9UJA3 840 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 PCDHB3Q9Y5E6 796 aa12.96□□□□□ -0.33
CDC42-202ENST00000344548 FAM149AA5PLN7 773 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 OR6C74A6NCV1 312 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 LRIT2A6NDA9 550 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 K7ESF4 209 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 SHMT2P34897 504 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 ASMTP46597 345 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 CASP9P55211 416 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 PDE7AQ13946 482 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 PLCL1Q15111 1095 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 CCNYL2Q5T2Q4 361 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 OGFRL1Q5TC84 451 aaPredicted RBP12.96□□□□□ -0.34
CDC42-202ENST00000344548 TSSK4Q6SA08 328 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 CAMKMTQ7Z624 323 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 CALHM3Q86XJ0 350 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 SPEM1Q8N4L4 309 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 OR2T12Q8NG77 320 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 GBP5Q96PP8 586 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 C17orf62Q9BQA9 187 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.34
CDC42-202ENST00000344548 TRIM4Q9C037 500 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 MYNNQ9NPC7 610 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 CCM2LQ9NUG4 571 aaPredicted RBP12.96□□□□□ -0.34
CDC42-202ENST00000344548 EVA1BQ9NVM1 165 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 TEX10Q9NXF1 929 aaPredicted RBP12.96□□□□□ -0.34
CDC42-202ENST00000344548 CPNE7Q9UBL6 633 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 BCAP29Q9UHQ4 241 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 ATP6V1HQ9UI12 483 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 UTS2RQ9UKP6 389 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 SPAG17Q6Q759 2223 aa12.96□□□□□ -0.34
CDC42-202ENST00000344548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TRBC2A0A5B9 178 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 DHRS12A0PJE2 317 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 AQP12BA6NM10 295 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 SH3BP5O60239 455 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NDUFS2O75306 463 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 PRKRAO75569 313 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 ABCB1P08183 1280 aaPredicted RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 JUNDP17535 347 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 ENGP17813 658 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 GGT1P19440 569 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 MAGP20916 626 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 AQP4P55087 323 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 UBE2IP63279 158 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 HBA1P69905 142 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 RPL6Q02878 288 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 ZIC1Q15915 447 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 DPY19L1Q2PZI1 675 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 GPR155Q7Z3F1 870 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 PARGQ86W56 976 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 AQP12AQ8IXF9 295 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TMEFF1Q8IYR6 380 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NELL1Q92832 810 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TRAPPC9Q96Q05 1148 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 SLAMF7Q9NQ25 335 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TMEM184CQ9NVA4 438 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 C6orf203Q9P0P8 240 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms