RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RIPOR1Q6ZS17 1223 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 VN1R5Q7Z5H4 357 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 TMPRSS11BQ86T26 416 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 GRHL3Q8TE85 626 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 HAS2Q92819 552 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 ESAMQ96AP7 390 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 VPS50Q96JG6 964 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CNDP1Q96KN2 507 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CPNE1Q99829 537 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 NSMCE4AQ9NXX6 385 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 MAP10Q9P2G4 905 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 COPG2Q9UBF2 871 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 CTNNAL1Q9UBT7 734 aa16.06■□□□□ 0.16
BRCC3-202ENST00000340647 HMX2A2RU54 273 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CHST10O43529 356 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CDC123O75794 336 aaPredicted RBP16.05■□□□□ 0.16
BRCC3-202ENST00000340647 WDPCPO95876 746 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CYC1P08574 325 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CCDC166P0CW27 439 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 GRK3P35626 688 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 GGT5P36269 586 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 ST13P50502 369 aaKnown RBP16.05■□□□□ 0.16
BRCC3-202ENST00000340647 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 SRSF11Q05519 484 aaKnown RBP16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CALCOCO2Q13137 446 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 EFTUD2Q15029 972 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■■■ 53.4
BRCC3-202ENST00000340647 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 ADAMTSL2Q86TH1 951 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 PRR7Q8TB68 274 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 TUBB6Q9BUF5 446 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 PHACTR1Q9C0D0 580 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 EPS8L2Q9H6S3 715 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 ZDHHC18Q9NUE0 388 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 CLDN16Q9Y5I7 305 aa16.05■□□□□ 0.16
BRCC3-202ENST00000340647 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 NCF1BA6NI72 391 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 NCF1CA8MVU1 366 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 FAM227AF5H4B4 570 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 WDR47O94967 919 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 NCF1P14598 390 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 CD22P20273 847 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 GP5P40197 560 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 MAGEA4P43358 317 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 HNMTP50135 292 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 RAB8AP61006 207 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 BTG2P78543 158 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 USP10Q14694 798 aaKnown RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 HERC3Q15034 1050 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 TLR1Q15399 786 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 IRAK1BP1Q5VVH5 260 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 PLAG1Q6DJT9 500 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 RPUSD3Q6P087 351 aaKnown RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 CMC1Q7Z7K0 106 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 OR1F2PQ96R84 312 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 SLX1AQ9BQ83 275 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 PLEKHB1Q9UF11 243 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 ZNF490Q9ULM2 529 aaPredicted RBP16.04■□□□□ 0.16
BRCC3-202ENST00000340647 KCNE2Q9Y6J6 123 aa16.04■□□□□ 0.16
BRCC3-202ENST00000340647 ITPR2Q14571 2701 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 ANKUB1A6NFN9 424 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 NDC80O14777 642 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 AGFG2O95081 481 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 SERPIND1P05546 499 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 FHP07954 510 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 GSTA2P09210 222 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 C1GALT1C1LP0DN25 315 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 HNRNPH1P31943 449 aaKnown RBP16.03■□□□□ 0.16
BRCC3-202ENST00000340647 HNF4AP41235 474 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 TDGF1P3P51864 188 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 CDC16Q13042 620 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 MFSD4BQ5TF39 518 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 FCRLBQ6BAA4 426 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 ISCA2Q86U28 154 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 ST6GALNAC3Q8NDV1 305 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 OR1N1Q8NGS0 311 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 FBF1Q8TES7 1133 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 SSC4DQ8WTU2 575 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 TBC1D20Q96BZ9 403 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 EGFL8Q99944 293 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 AIF1LQ9BQI0 150 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 LRRC1Q9BTT6 524 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 SLC29A3Q9BZD2 475 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 RNF32Q9H0A6 362 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 PTBP2Q9UKA9 531 aaKnown RBP16.03■□□□□ 0.16
BRCC3-202ENST00000340647 DYRK1BQ9Y463 629 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 MYO7BQ6PIF6 2116 aa16.03■□□□□ 0.16
BRCC3-202ENST00000340647 CRYBG3Q68DQ2 2970 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 IGKV3D-11A0A0A0MRZ8 115 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 MAGEB17A8MXT2 336 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 TGFBR3LH3BV60 316 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 LDLRP01130 860 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 SERPINA6P08185 405 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 HSPA7P48741 367 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 RAB10P61026 200 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 RUNX2Q13950 521 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 E2F2Q14209 437 aa16.02■□□□□ 0.16
BRCC3-202ENST00000340647 ABRAXAS2Q15018 415 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms