RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 LHX9Q9NQ69 397 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 STARD5Q9NSY2 213 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 H3BMH7 237 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 PLPP1O14494 284 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 SRPX2O60687 465 aaPredicted RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 SEC22BO75396 215 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 SEMA3DO95025 777 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 SLC35G6P0C7Q6 338 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 CSRP1P21291 193 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 ID4P47928 161 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 NOVA1P51513 510 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 CLDN6P56747 220 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 ERVK-8P63133 956 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 RAE1P78406 368 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 E2F1Q01094 437 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 COL9A2Q14055 689 aaPredicted RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 TOR1AIP1Q5JTV8 583 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 WASHC2DQ5SRD0 308 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 RBM44Q6ZP01 1051 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 CACNA2D3Q8IZS8 1091 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 METTL4Q8N3J2 472 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 ARHGEF39Q8N4T4 335 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 C1orf52Q8N6N3 182 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 FNDC5Q8NAU1 212 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 CAMKVQ8NCB2 501 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 FCRL1Q96LA6 429 aa20.49■□□□□ 0.87
TPM1-204ENST00000334895 REXO4Q9GZR2 422 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 RUVBL1Q9Y265 456 aaKnown RBP20.49■□□□□ 0.87
TPM1-204ENST00000334895 AGRPO00253 132 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 RTCAO00442 366 aaKnown RBP20.48■□□□□ 0.87
TPM1-204ENST00000334895 DKK1O94907 266 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 MSL3P1P0C860 447 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 DIO3P55073 304 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 EMX2Q04743 252 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 RGS1Q08116 209 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 TRA2AQ13595 282 aaKnown RBP eCLIP20.48■□□□□ 0.87
TPM1-204ENST00000334895 PUM1Q14671 1186 aaKnown RBP eCLIP20.48■□□□□ 0.875e-9■□□□□ 8.1
TPM1-204ENST00000334895 C16orf72Q14CZ0 275 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 PRTGQ2VWP7 1150 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 CDCP2Q5VXM1 449 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 CATSPER2Q96P56 530 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 ZNF385DQ9H6B1 395 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 NMRK1Q9NWW6 199 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 SIDT1Q9NXL6 827 aaKnown RBP20.48■□□□□ 0.87
TPM1-204ENST00000334895 G3BP2Q9UN86 482 aaKnown RBP20.48■□□□□ 0.87
TPM1-204ENST00000334895 DLGAP4Q9Y2H0 992 aa20.48■□□□□ 0.87
TPM1-204ENST00000334895 MRPS2Q9Y399 296 aaKnown RBP20.48■□□□□ 0.87
TPM1-204ENST00000334895 SPTBN2O15020 2390 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 MAP3K7O43318 606 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 BSGP35613 385 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 GABPB1Q06547 395 aaPredicted RBP20.47■□□□□ 0.87
TPM1-204ENST00000334895 SMU1Q2TAY7 513 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 TMEM35AQ53FP2 167 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 TMTC4Q5T4D3 741 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 METTL21CQ5VZV1 264 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 TMEM214Q6NUQ4 689 aaKnown RBP20.47■□□□□ 0.87
TPM1-204ENST00000334895 ABHD17CQ6PCB6 329 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 COMMD6Q7Z4G1 85 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 METTL2AQ96IZ6 378 aaKnown RBP20.47■□□□□ 0.87
TPM1-204ENST00000334895 NMUR2Q9GZQ4 415 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 SPRTNQ9H040 489 aaPredicted RBP20.47■□□□□ 0.87
TPM1-204ENST00000334895 ENAMQ9NRM1 1142 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 SIRT5Q9NXA8 310 aa20.47■□□□□ 0.87
TPM1-204ENST00000334895 POLR3HQ9Y535 204 aaPredicted RBP20.47■□□□□ 0.87
TPM1-204ENST00000334895 A0A0G2JN53 185 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 SPAARA0A1B0GVQ0 90 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 TMEM150CB9EJG8 249 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 UBDO15205 165 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 ERI3O43414 337 aaKnown RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 HYAL3O43820 417 aaPredicted RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 KLHL18O94889 574 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 KCNK5O95279 499 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 MED26O95402 600 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 B3GALT4O96024 378 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 SMIM10L1P0DMW3 83 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 CCKBRP32239 447 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 PLA2G16P53816 162 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 STXBP1P61764 594 aaKnown RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 ACSM2AQ08AH3 577 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 SPIN4Q56A73 249 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 MANEAQ5SRI9 462 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 IL23RQ5VWK5 629 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 ACSM2BQ68CK6 577 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 DHRS13Q6UX07 377 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 SPATA19Q7Z5L4 167 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 MTDHQ86UE4 582 aaKnown RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 AMER3Q8N944 861 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 OR2L5Q8NG80 312 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 OR1L3Q8NH93 324 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 ZCCHC10Q8TBK6 192 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 UTP15Q8TED0 518 aaKnown RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 ZNF501Q96CX3 271 aaPredicted RBP20.46■□□□□ 0.87
TPM1-204ENST00000334895 SMIM10Q96HG1 83 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 C17orf62Q9BQA9 187 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 EBPLQ9BY08 206 aa20.46■□□□□ 0.87
TPM1-204ENST00000334895 EEDO75530 441 aaKnown RBP20.45■□□□□ 0.87
TPM1-204ENST00000334895 ZNF888P0CJ79 500 aaPredicted RBP20.45■□□□□ 0.87
TPM1-204ENST00000334895 CEACAM1P13688 526 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 RAB8AP61006 207 aa20.45■□□□□ 0.87
TPM1-204ENST00000334895 NOXRED1Q6NXP6 359 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms