RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 METTL2BQ6P1Q9 378 aaKnown RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 WDR74Q6RFH5 385 aaPredicted RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 RBM44Q6ZP01 1051 aaKnown RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 RNF165Q6ZSG1 346 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 AMIGO1Q86WK6 493 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 CARM1Q86X55 608 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 DCUN1D3Q8IWE4 304 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 SLC15A3Q8IY34 581 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 RSC1A1Q92681 617 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 RAD51AP1Q96B01 352 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 ZNF382Q96SR6 550 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 PCDHAC1Q9H158 963 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 COQ10BQ9H8M1 238 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 SLC52A3Q9NQ40 469 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 AIG1Q9NVV5 245 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 NUDT4Q9NZJ9 180 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 CIDEBQ9UHD4 219 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 PLAGL1Q9UM63 463 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 ICKQ9UPZ9 632 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 SNX13Q9Y5W8 968 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 USP24Q9UPU5 2620 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 ARHGEF33A8MVX0 844 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 D6RAR5 112 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 NR5A2O00482 541 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 EEDO75530 441 aaKnown RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 ATP6AP2O75787 350 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 H6PDO95479 791 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 CATP04040 527 aaKnown RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 CSF2RBP32927 897 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 PDX1P52945 283 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 ERVK-8P63133 956 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 FXNQ16595 210 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 CLPPQ16740 277 aaPredicted RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 ISXQ2M1V0 245 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 AP1ARQ63HQ0 302 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 KLHL35Q6PF15 583 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 ZBTB49Q6ZSB9 765 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 RPS27LQ71UM5 84 aaKnown RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 FKBP9P1Q75LS8 142 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 SATL1Q86VE3 508 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 RETREG3Q86VR2 466 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 CACTIN-AS1Q8N1I8 211 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 MYO1HQ8N1T3 1032 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 GALNT4Q8N4A0 578 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 FAM156AQ8NDB6 213 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 LRTOMTQ8WZ04 291 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 POP5Q969H6 163 aaKnown RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 C9orf16Q9BUW7 83 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 LEF1Q9UJU2 399 aaPredicted RBP12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 PCTPQ9UKL6 214 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 PCDHA9Q9Y5H5 950 aa12.9□□□□□ -0.35
TUBB2A-201ENST00000333628 APC2O95996 2303 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 ACACAQ13085 2346 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 DHRS12A0PJE2 317 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 OR5K3A6NET4 321 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 FXYD1O00168 92 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 BTN3A3O00478 584 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 NME4O00746 187 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 CAPN5O15484 640 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 KDM1AO60341 852 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 SIX3O95343 332 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 ZNF23P17027 643 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 POLR2CP19387 275 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 SLC6A2P23975 617 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 FASP25445 335 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 SHMT2P34897 504 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 CDKL1Q00532 357 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 ZFP36L1Q07352 338 aaKnown RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 CYP4F3Q08477 520 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 PCBP2Q15366 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 KCTD21Q4G0X4 260 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 PROSER1Q86XN7 944 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 PLXDC1Q8IUK5 500 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 ADGRF3Q8IZF5 1079 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 LMNTD1Q8N9Z9 388 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 FBXO15Q8NCQ5 510 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 PAPD5Q8NDF8 572 aaKnown RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 OR4D9Q8NGE8 314 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 OR9I1Q8NGQ6 314 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 EXT2Q93063 718 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 CENPNQ96H22 339 aaPredicted RBP12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 DEPDC7Q96QD5 511 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 DPYSL5Q9BPU6 564 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 MENTQ9BUN1 341 aa12.89□□□□□ -0.35
TUBB2A-201ENST00000333628 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms