RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PKMP14618 531 aaKnown RBP11.46□□□□□ -0.58
LIMK2-202ENST00000333611 CBR1P16152 277 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 RGRP47804 291 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 KCNQ1P51787 676 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 VSX2P58304 361 aaPredicted RBP11.46□□□□□ -0.58
LIMK2-202ENST00000333611 LRRC32Q14392 662 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 SYT6Q5T7P8 510 aaPredicted RBP11.46□□□□□ -0.58
LIMK2-202ENST00000333611 LCN1P1Q5VSP4 162 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 Q6ZSR9 355 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 ZDHHC21Q8IVQ6 265 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 GPR65Q8IYL9 337 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 TAGAPQ8N103 731 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 PAPD5Q8NDF8 572 aaKnown RBP11.46□□□□□ -0.58
LIMK2-202ENST00000333611 BEST4Q8NFU0 473 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 DNAJA4Q8WW22 397 aaPredicted RBP11.46□□□□□ -0.58
LIMK2-202ENST00000333611 DNASE1L2Q92874 299 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 OR52E6Q96RD3 313 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 KATNBL1Q9H079 304 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 HCN3Q9P1Z3 774 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 FBXO10Q9UK96 956 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 ZNF175Q9Y473 711 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 LOC105369274A0A096LPK9 316 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 MROH6A6NGR9 719 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 PRSS23O95084 383 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CDRT1O95170 752 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 OR5F1O95221 314 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 FGF1P05230 155 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SLC2A2P11168 524 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RHOQP17081 205 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 HNMTP50135 292 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 HK3P52790 923 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RPS24P62847 133 aaKnown RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SLC35A2P78381 396 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 FAM189BP81408 668 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 TIAL1Q01085 375 aaKnown RBP eCLIP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 EMX2Q04743 252 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ELP6Q0PNE2 266 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RFX4Q33E94 735 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 BCL2L15Q5TBC7 163 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 LAIR1Q6GTX8 287 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SAMD14Q8IZD0 417 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 OR4N4Q8N0Y3 316 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 OR6M1Q8NGM8 313 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 NANPQ8TBE9 248 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 C2CD4CQ8TF44 421 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SLC13A3Q8WWT9 602 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SLC9A6Q92581 669 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 TRIM62Q9BVG3 475 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CCNB1IP1Q9NPC3 277 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CUEDC1Q9NWM3 386 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 NPAP1Q9NZP6 1156 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 STON1Q9Y6Q2 735 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SBF1O95248 1867 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 INMT-MINDY4F8WBC2 141 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CXCR6O00574 342 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 PPM1BO75688 479 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 PEX11BO96011 259 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 PTHP01270 115 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 HTR1EP28566 365 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SOX3P41225 446 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 DCDC1P59894 354 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 MRPS6P82932 125 aaKnown RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ARHGEF7Q14155 803 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ZBTB37Q5TC79 503 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 MBOAT1Q6ZNC8 495 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 DNAJB7Q7Z6W7 309 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 LIX1Q8N485 282 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 OR5K1Q8NHB7 308 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RNF170Q96K19 258 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RAD18Q9NS91 495 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ADAM30Q9UKF2 790 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 MYO10Q9HD67 2058 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ELOVL7A1L3X0 281 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SSNA1O43805 119 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 JUPP14923 745 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CSTF2P33240 577 aaKnown RBP eCLIP11.45□□□□□ -0.588e-7■■■□□ 17.6
LIMK2-202ENST00000333611 KIR2DL3P43628 341 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 MAP2K3P46734 347 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 CASP9P55211 416 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ZNF33AQ06730 810 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 TAF10Q12962 218 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 HNRNPA0Q13151 305 aaKnown RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 DDX39BQ13838 428 aaKnown RBP11.45□□□□□ -0.58
LIMK2-202ENST00000333611 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ZFAND4Q86XD8 727 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 ATP6V1C2Q8NEY4 427 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 GPR63Q9BZJ6 419 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 PRKAG2Q9UGJ0 569 aa11.45□□□□□ -0.58
LIMK2-202ENST00000333611 RFPL3O75679 317 aa11.44□□□□□ -0.58
LIMK2-202ENST00000333611 IFNA7P01567 189 aa11.44□□□□□ -0.58
LIMK2-202ENST00000333611 PRKAR1AP10644 381 aa11.44□□□□□ -0.58
LIMK2-202ENST00000333611 CLCN4P51793 760 aa11.44□□□□□ -0.58
LIMK2-202ENST00000333611 RPP38P78345 283 aaKnown RBP11.44□□□□□ -0.58
LIMK2-202ENST00000333611 OLR1P78380 273 aa11.44□□□□□ -0.58
LIMK2-202ENST00000333611 FOXM1Q08050 763 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms