RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 LAS2Q8IYD9 372 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 ARMC2Q8NEN0 867 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 TRPC4APQ8TEL6 797 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 CCDC126Q96EE4 140 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 SEC16BQ96JE7 1060 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 RHBGQ9H310 441 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 KLHL31Q9H511 634 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 SENP1Q9P0U3 644 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 TRPC4Q9UBN4 977 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 MID2Q9UJV3 735 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 PLLPQ9Y342 182 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 NAALAD2Q9Y3Q0 740 aa15.08■□□□□ 0.01
CCDC28A-201ENST00000332797 CDC14CA4D256 554 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 ZNF860A6NHJ4 632 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 H0YIG0 161 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 RDH16O75452 317 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 KLF7O75840 302 aaPredicted RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 B3GALT4O96024 378 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 ALBP02768 609 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 CPA3P15088 417 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 ALOX12P18054 663 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 IMPDH1P20839 514 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 FOLR3P41439 243 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 MAT1AQ00266 395 aaKnown RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 OCA2Q04671 838 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 CLCQ05315 142 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 TRAF3Q13114 568 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 DDX39BQ13838 428 aaKnown RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 CASP8Q14790 479 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 NKG7Q16617 165 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 CPSF6Q16630 551 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC28A-201ENST00000332797 SYT16Q17RD7 645 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 DEFB134Q4QY38 66 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 SHISA6Q6ZSJ9 500 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 AFAP1L2Q8N4X5 818 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 CCNYL1Q8N7R7 359 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 AMER3Q8N944 861 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 L3MBTL4Q8NA19 623 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 OR7G3Q8NG95 312 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 UTP15Q8TED0 518 aaKnown RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 SNRNP27Q8WVK2 155 aaKnown RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 L3HYPDHQ96EM0 354 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 FAM111AQ96PZ2 611 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 NTMT1Q9BV86 223 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 AICDAQ9GZX7 198 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 SLC26A1Q9H2B4 701 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 SOX17Q9H6I2 414 aaPredicted RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 WDR54Q9H977 334 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 ARGLU1Q9NWB6 273 aaPredicted RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 HCN3Q9P1Z3 774 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 SLC17A7Q9P2U7 560 aa15.08■□□□□ 0
CCDC28A-201ENST00000332797 ZNF282Q9UDV7 671 aaPredicted RBP15.08■□□□□ 0
CCDC28A-201ENST00000332797 PTPRQQ9UMZ3 2332 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 NBEAQ8NFP9 2946 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 C4orf51C9J302 202 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 PPP6CO00743 305 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 OTCP00480 354 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 MYZAPP0CAP1 466 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 SERPINB1P30740 379 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 HNRNPH1P31943 449 aaKnown RBP15.07■□□□□ 0
CCDC28A-201ENST00000332797 MILR1Q7Z6M3 343 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 TMEM151BQ8IW70 566 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 PRSS58Q8IYP2 241 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 OR4F6Q8NGB9 312 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 OR2Y1Q8NGV0 311 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 TCP10LQ8TDR4 215 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 GAL3ST3Q96A11 431 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 REPS1Q96D71 796 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 LHX6Q9UPM6 363 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 MAP4K5Q9Y4K4 846 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 PCDHGA11Q9Y5H2 935 aa15.07■□□□□ 0
CCDC28A-201ENST00000332797 A0A0G2JN53 185 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 LRIT2A6NDA9 550 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 H0YIV9 168 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 ERI3O43414 337 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 GALR3O60755 368 aaPredicted RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 SH3BGRLO75368 114 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 TBX6O95947 436 aaPredicted RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 FURINP09958 794 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 OTX2P32243 289 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 HPDP32754 393 aaPredicted RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 SKP1P63208 163 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 PCLAFQ15004 111 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 ZRSR2Q15696 482 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 UGT8Q16880 541 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 CRTC2Q53ET0 693 aaPredicted RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 VWA2Q5GFL6 755 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 EXOC3L1Q86VI1 746 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 C10orf107Q8IVU9 208 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 RNF175Q8N4F7 328 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 HUS1BQ8NHY5 278 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 STT3BQ8TCJ2 826 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 ZNF473Q8WTR7 871 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 MIEF2Q96C03 454 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 MS4A6EQ96DS6 147 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 PGM2Q96G03 612 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 FAR2Q96K12 515 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 MTERF1Q99551 399 aaKnown RBP15.06■□□□□ 0
CCDC28A-201ENST00000332797 SPSB2Q99619 263 aa15.06■□□□□ 0
CCDC28A-201ENST00000332797 MS4A8Q9BY19 250 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms