RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 DENND5AQ6IQ26 1287 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 REXO1L1PQ8IX06 675 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 KIF2BQ8N4N8 673 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 CSNK1A1LQ8N752 337 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 ELP5Q8TE02 316 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 TTC1Q99614 292 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 MIPEPQ99797 713 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 PLA2G12AQ9BZM1 189 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 GSX2Q9BZM3 304 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 ETNK1Q9HBU6 452 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 LIPGQ9Y5X9 500 aa13.77□□□□□ -0.21
CTHRC1-201ENST00000330295 DSCAMO60469 2012 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC5A10A0PJK1 596 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 OR2W5A6NFC9 320 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 FAM166BA8MTA8 275 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 ARHGEF33A8MVX0 844 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 ACOT7O00154 380 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 QSOX1O00391 747 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 IGHG3P01860 377 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 TPH1P17752 444 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 PSMB5P28074 263 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC26A5P58743 744 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 GRB7Q14451 532 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 POU6F1Q14863 301 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 GPR33Q49SQ1 333 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC35F6Q8N357 371 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 ARHGEF39Q8N4T4 335 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 OR2L3Q8NG85 312 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 PPP1R14CQ8TAE6 165 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 ALKBH4Q9NXW9 302 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 ACAD8Q9UKU7 415 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 TTC7AQ9ULT0 858 aaPredicted RBP13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 NPFFR2Q9Y5X5 522 aa13.76□□□□□ -0.21
CTHRC1-201ENST00000330295 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 F8W8V4 182 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 SLC16A5O15375 505 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 GABRA1P14867 456 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 ACRV1P26436 265 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 PTH2RP49190 550 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 ZNF140P52738 457 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 BASP1P80723 227 aaKnown RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 PLGLB1Q02325 96 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 ACTN3Q08043 901 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 PTK6Q13882 451 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 SYTL3Q4VX76 610 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 DNAJC21Q5F1R6 531 aaKnown RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 WLSQ5T9L3 541 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 FBXO42Q6P3S6 717 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 MDGA2Q7Z553 956 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 SHISA5Q8N114 240 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 CYP4Z2PQ8N1L4 340 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 NAXEQ8NCW5 288 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 MAPK1IP1LQ8NDC0 245 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 CNPPD1Q9BV87 410 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 KCNF1Q9H3M0 494 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 EIF2B3Q9NR50 452 aaKnown RBP13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 YAE1D1Q9NRH1 226 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 PKD1L1Q8TDX9 2849 aa13.75□□□□□ -0.21
CTHRC1-201ENST00000330295 A0A087X1B8 175 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 AQP7O14520 342 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 FCHO1O14526 889 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 AP2A2O94973 939 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 TCP1P17987 556 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 FPR1P21462 350 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 ADRA1DP25100 572 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 CDK16Q00536 496 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 PLOD1Q02809 727 aaPredicted RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 CAPRIN1Q14444 709 aaKnown RBP13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 RGS9BPQ6ZS82 235 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 SEM1Q6ZVN7 128 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 TRILQ7L0X0 811 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 SERPINA9Q86WD7 417 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 RASGEF1CQ8N431 466 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 OR52K1Q8NGK4 314 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 OSBPL9Q96SU4 736 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 SYNPO2LQ9H987 977 aa13.74□□□□□ -0.21
CTHRC1-201ENST00000330295 DEPPQ9NTK1 212 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms