RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 BCKDHAP12694 445 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 CD59P13987 128 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ANPEPP15144 967 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 CCR8P51685 355 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC7A2P52569 658 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 MS4A2Q01362 244 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 AMZ1Q400G9 498 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 TIGD2Q4W5G0 525 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 PAGE3Q5JUK9 113 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 SPRED1Q7Z699 444 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 FAM129CQ86XR2 697 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 RNF148Q8N7C7 305 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 OR6C4Q8NGE1 309 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 DPH7Q9BTV6 452 aa17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 ASCC3Q8N3C0 2202 aaKnown RBP17.95■□□□□ 0.46
EXOSC3-201ENST00000327304 HEATR5BQ9P2D3 2071 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 FLRT2O43155 660 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 IL6P05231 212 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 CKMT1AP12532 417 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 PVRP15151 417 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC6A2P23975 617 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 CLDN8P56748 225 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 CSNK1G2P78368 415 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 DAB2P98082 770 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 LAPTM5Q13571 262 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 PTGR1Q14914 329 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC5A12Q1EHB4 618 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 INAVAQ3KP66 663 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 PAGE2BQ5JRK9 111 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 WLSQ5T9L3 541 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 ADNP2Q6IQ32 1131 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 IRGCQ6NXR0 463 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 MED27Q6P2C8 311 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 ADCK2Q7Z695 626 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 OR4K1Q8NGD4 311 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 ANKRD27Q96NW4 1050 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 KLHL25Q9H0H3 589 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 CLMPQ9H6B4 373 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 VPS29Q9UBQ0 182 aa17.94■□□□□ 0.46
EXOSC3-201ENST00000327304 C15orf38-AP3S2A0A0A6YYH1 394 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 MAP3K7O43318 606 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 PNLIPP16233 465 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CD1CP29017 333 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 GRIA3P42263 894 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 GFERP55789 205 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 REEP5Q00765 189 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 AASDHQ4L235 1098 aaPredicted RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 ARPINQ7Z6K5 226 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC15A3Q8IY34 581 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 OR7G3Q8NG95 312 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 RHBDD1Q8TEB9 315 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 NCSTNQ92542 709 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 APIPQ96GX9 242 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 AHCYL2Q96HN2 611 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 PHOX2BQ99453 314 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC39A3Q9BRY0 314 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 PCDHA9Q9Y5H5 950 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 A0A0J9YY10 115 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 FEZF1A0PJY2 475 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 C4orf47A7E2U8 309 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CAPN5O15484 640 aaPredicted RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 HSD17B1P14061 328 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 MAGP20916 626 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CSF2RBP32927 897 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 VHLP40337 213 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CLNS1AP54105 237 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CFHR1Q03591 330 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC14A1Q13336 389 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 ZNF425Q6IV72 752 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 ZFP1Q6P2D0 407 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 LRRC74BQ6ZQY2 392 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 PLD3Q8IV08 490 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 LAS2Q8IYD9 372 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 PYDC1Q8WXC3 89 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 NAT6Q93015 286 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CNDP2Q96KP4 475 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 AIF1LQ9BQI0 150 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 CCDC3Q9BQI4 270 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 IL1RL2Q9HB29 575 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 TMEM184CQ9NVA4 438 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 TSC22D4Q9Y3Q8 395 aa17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 ZFHX2Q9C0A1 2572 aaPredicted RBP17.93■□□□□ 0.46
EXOSC3-201ENST00000327304 NME4O00746 187 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 HAT1O14929 419 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 DUX1O43812 170 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 SH3BP5O60239 455 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 GDF9O60383 454 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 PRAMEF10O60809 474 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 LDOC1O95751 146 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 HOXB3P14651 431 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 ERFP50548 548 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 GPLD1P80108 840 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 HIST2H2ACQ16777 129 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 FCRL6Q6DN72 434 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 HIST2H2AA3Q6FI13 130 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 NOXRED1Q6NXP6 359 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 FAM92BQ6ZTR7 304 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 USP53Q70EK8 1073 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 PAQR7Q86WK9 346 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms