RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 HEXA-AS1Q9H8Q6 139 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 A4GALTQ9NPC4 353 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 WASH6PQ9NQA3 447 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PCDHB11Q9Y5F2 797 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SYNJ2BP-COX16A0A087WUM0 186 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 AGAP5A6NIR3 686 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CHURC1-FNTBB4DL54 471 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 XPNPEP2O43895 674 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 NOBOXO60393 691 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 KCNH1O95259 989 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CLDN7O95471 211 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 ZBTB11O95625 1053 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CTSHP09668 335 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 HSD3B1P14060 373 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SLC2A5P22732 501 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 HSD3B2P26439 372 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 BSGP35613 385 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 MAP2K4P45985 399 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SELENOWP63302 87 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 DUSP2Q05923 314 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 FHL5Q5TD97 284 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 GLT6D1Q7Z4J2 308 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 VTCN1Q7Z7D3 282 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SHISA5Q8N114 240 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CCNYL1Q8N7R7 359 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 ANKRD53Q8N9V6 530 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 OSCP1Q8WVF1 389 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 MTFMTQ96DP5 389 aaKnown RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CIPCQ9C0C6 399 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 OR52A5Q9H2C5 316 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 TMEM245Q9H330 911 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 NDUFB11Q9NX14 153 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 COX16Q9P0S2 106 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 COQ6Q9Y2Z9 468 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 POLR3HQ9Y535 204 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 ELOVL7A1L3X0 281 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 TAF4O00268 1085 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 RFXAPO00287 272 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GPX5O75715 221 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SMIM10L1P0DMW3 83 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 IL9P15248 144 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 TPP2P29144 1249 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CORO1AP31146 461 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 KDELR2P33947 212 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 MMP12P39900 470 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 HMGCS1Q01581 520 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DPTQ07507 201 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ART3Q13508 389 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 NOXRED1Q6NXP6 359 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CYP2U1Q7Z449 544 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 MMAAQ8IVH4 418 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 LILRA3Q8N6C8 439 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SLC47A1Q96FL8 570 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SMIM10Q96HG1 83 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 PPM1MQ96MI6 270 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 NRTNQ99748 197 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 MED18Q9BUE0 208 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DGCR6LQ9BY27 220 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 POLR1BQ9H9Y6 1135 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 FAM50BQ9Y247 325 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 TBKBP1A7MCY6 615 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF99A8MXY4 864 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 J3QRK9 145 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 PLA2G10O15496 165 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 OTCP00480 354 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 PTHP01270 115 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 IFI6P09912 130 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GRK3P35626 688 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CSKP41240 450 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 METAP1P53582 386 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 IL2P60568 153 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ALDH6A1Q02252 535 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CHRNA6Q15825 494 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DUOXA1Q1HG43 343 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SOWAHCQ53LP3 525 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 Q6ZPB1 254 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ANKS3Q6ZW76 656 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ADAMTSL2Q86TH1 951 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GPSM1Q86YR5 675 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SPATA2LQ8IUW3 424 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 UBALD2Q8IYN6 164 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 RDH10Q8IZV5 341 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CLDN19Q8N6F1 224 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 TM9SF4Q92544 642 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF426Q9BUY5 554 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 FSD1LQ9BXM9 530 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DSN1Q9H410 356 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GID8Q9NWU2 228 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 PNMA8BQ9ULN7 279 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CCL26Q9Y258 94 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SH3GLB1Q9Y371 365 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 PRAMEF33A0A0G2JMD5 474 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 A0A0X1KG70 313 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 BTN3A1O00481 513 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms