RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 C6orf50Q9HD87 102 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SARS2Q9NP81 518 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 GTSE1Q9NYZ3 720 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 RAP2CQ9Y3L5 183 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 USP54Q70EL1 1684 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 MAGEB6P1A0A0J9YX57 407 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SLC22A3O75751 556 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 MT-ND2P03891 347 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 OR8G3PP0DMU2 310 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 DNASE1P24855 282 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 MAP3K8P41279 467 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 RGS6P49758 472 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SLC26A5P58743 744 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 PKIAP61925 76 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 GAGE1Q13065 139 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SLC35D3Q5M8T2 416 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SLC35C1Q96A29 364 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 FCRL3Q96P31 734 aaPredicted RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 VAT1Q99536 393 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 H2AFJQ9BTM1 129 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 PI4K2AQ9BTU6 479 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TGIF2Q9GZN2 237 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 WDR55Q9H6Y2 383 aaPredicted RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 V9GYH0 126 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 LRP6O75581 1613 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 A0A087X0M5 115 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 LOC100130705A0A1B0GUX0 176 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 A0A1B0GX30 115 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 URADA6NGE7 173 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 DISC1C4P0D8 188 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 NPR2P20594 1047 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 GADD45AP24522 165 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TNFRSF9Q07011 255 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TDGQ13569 410 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TRAM1Q15629 374 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 ZNF691Q5VV52 312 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 ZNF720Q7Z2F6 126 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 NPAS4Q8IUM7 802 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 MAPK15Q8TD08 544 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SLAMF9Q96A28 289 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 RPL10LQ96L21 214 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 ZNF599Q96NL3 588 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 CASD1Q96PB1 797 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TSNAXQ99598 290 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 CD244Q9BZW8 370 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 NSMCE4AQ9NXX6 385 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 USP18Q9UMW8 372 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 XPNPEP2O43895 674 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 DPEP1P16444 411 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 PRKCHP24723 683 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 AZGP1P25311 298 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 CEACAM6P40199 344 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 RPL14P50914 215 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 USP10Q14694 798 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 EIF4HQ15056 248 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 PTPN20Q4JDL3 420 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TRIQKQ629K1 86 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 FAM131AQ6UXB0 335 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 SPNS3Q6ZMD2 512 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 DCUN1D3Q8IWE4 304 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 EFHBQ8N7U6 833 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 FAM181AQ8N9Y4 354 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 OR8J2Q8NGG1 315 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 C22orf15Q8WYQ4 148 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 CXorf58Q96LI9 332 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 GFM1Q96RP9 751 aaKnown RBP9.01□□□□□ -0.97
BDNF-201ENST00000314915 TINF2Q9BSI4 451 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TRIM54Q9BYV2 358 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 CTPS2Q9NRF8 586 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 ZSCAN32Q9NX65 697 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 FEM1BQ9UK73 627 aa9.01□□□□□ -0.97
BDNF-201ENST00000314915 TCRBV16S1A1N1A0A5B0 115 aa9□□□□□ -0.97
BDNF-201ENST00000314915 PRMT5O14744 637 aaPredicted RBP9□□□□□ -0.97
BDNF-201ENST00000314915 RAD17O75943 681 aa9□□□□□ -0.97
BDNF-201ENST00000314915 CNOT4O95628 575 aaKnown RBP9□□□□□ -0.97
BDNF-201ENST00000314915 SNRPB2P08579 225 aaKnown RBP9□□□□□ -0.97
BDNF-201ENST00000314915 FMO3P31513 532 aa9□□□□□ -0.97
BDNF-201ENST00000314915 RAB5CP51148 216 aa9□□□□□ -0.97
BDNF-201ENST00000314915 EPHA4P54764 986 aa9□□□□□ -0.97
BDNF-201ENST00000314915 IL5RAQ01344 420 aa9□□□□□ -0.97
BDNF-201ENST00000314915 SGO1Q5FBB7 561 aa9□□□□□ -0.97
BDNF-201ENST00000314915 RAB12Q6IQ22 244 aa9□□□□□ -0.97
BDNF-201ENST00000314915 ZFP82Q8N141 532 aa9□□□□□ -0.97
BDNF-201ENST00000314915 ANKRD52Q8NB46 1076 aa9□□□□□ -0.97
BDNF-201ENST00000314915 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
BDNF-201ENST00000314915 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
BDNF-201ENST00000314915 MCCC1Q96RQ3 725 aaPredicted RBP9□□□□□ -0.97
BDNF-201ENST00000314915 VAT1LQ9HCJ6 419 aa9□□□□□ -0.97
BDNF-201ENST00000314915 GALNT9Q9HCQ5 603 aa9□□□□□ -0.97
BDNF-201ENST00000314915 SIRT7Q9NRC8 400 aa9□□□□□ -0.97
BDNF-201ENST00000314915 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
BDNF-201ENST00000314915 TEX10Q9NXF1 929 aaPredicted RBP9□□□□□ -0.97
BDNF-201ENST00000314915 SLC39A10Q9ULF5 831 aa9□□□□□ -0.97
BDNF-201ENST00000314915 NIP7Q9Y221 180 aaKnown RBP eCLIP9□□□□□ -0.97
BDNF-201ENST00000314915 DIP2BQ9P265 1576 aa9□□□□□ -0.97
BDNF-201ENST00000314915 LOC100506127A0A0U1RQW1 187 aa9□□□□□ -0.97
BDNF-201ENST00000314915 M0QZK8 103 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms