RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FAM192AQ9GZU8 254 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 SUSD2Q9UGT4 822 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 AK4P27144 223 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 KCNC1P48547 511 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 CLCN7P51798 805 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ADARP55265 1226 aaKnown RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 TDGQ13569 410 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GRHL2Q6ISB3 625 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 POMZP3Q6PJE2 187 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 NEIL2Q969S2 332 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 APIPQ96GX9 242 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 A0A096LPI6 279 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GFRA2O00451 464 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 ALPPP05187 535 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 HHEXQ03014 270 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 SLAMF1Q13291 335 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 FAM214AQ32MH5 1076 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 FAM109BQ6ICB4 259 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 ZNF544Q6NX49 715 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GJD3Q8N144 294 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ZNF480Q8WV37 535 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 RAB8BQ92930 207 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 BIRC8Q96P09 236 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ZNF347Q96SE7 839 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 NOBOXO60393 691 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 CCNB2O95067 398 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 GPR68Q15743 365 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ZNF630Q2M218 657 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 WSCD2Q2TBF2 565 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ZNF761Q86XN6 746 aaPredicted RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 RNF130Q86XS8 419 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 SMYD1Q8NB12 490 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 OR5K1Q8NHB7 308 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 NFKBIDQ8NI38 313 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 PNO1Q9NRX1 252 aaKnown RBP13.16□□□□□ -0.3
DDX54-202ENST00000314045 MARK1Q9P0L2 795 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 SERTAD3Q9UJW9 196 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
DDX54-202ENST00000314045 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 INHBCP55103 352 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 SRP54P61011 504 aaKnown RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 CDC73Q6P1J9 531 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 ZDHHC12Q96GR4 267 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 PTBP2Q9UKA9 531 aaKnown RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 TRBC2A0A5B9 178 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 MAN1A2O60476 641 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 REM1O75628 298 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 T-ENOLP0DO92 83 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CXCL12P48061 93 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 ACVR1Q04771 509 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 HYAL2Q12891 473 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 COL9A2Q14055 689 aaPredicted RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 BNIPLQ7Z465 357 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 MINDY1Q8N5J2 469 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 C3orf30Q96M34 536 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 NTMT1Q9BV86 223 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CASP8AP2Q9UKL3 1982 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 LOC100506127A0A0U1RQW1 187 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 BTN3A3O00478 584 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 UGDHO60701 494 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 SDC3O75056 442 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 LYNP07948 512 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CAPN3P20807 821 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CDK9P50750 372 aaKnown RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 KLHL12Q53G59 568 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 ZNF248Q8NDW4 579 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 TMEM184CQ9NVA4 438 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 LYARQ9NX58 379 aaKnown RBP13.15□□□□□ -0.3
DDX54-202ENST00000314045 MS4A12Q9NXJ0 267 aa13.15□□□□□ -0.3
DDX54-202ENST00000314045 EEDO75530 441 aaKnown RBP13.14□□□□□ -0.31
DDX54-202ENST00000314045 DCDC1P59894 354 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 DAG1Q14118 895 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 SPATS1Q496A3 300 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 OR2T5Q6IEZ7 315 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 OGFOD2Q6N063 350 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms