RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 A8MUI8 341 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 LRRTM2O43300 516 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 CAP1Q01518 475 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 DNASE1L3Q13609 305 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 SHDQ96IW2 340 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 STRA6Q9BX79 667 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 C17orf113A0A1B0GUU1 675 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 A0A1W2PP18 115 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 DSC2Q02487 901 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 DSC3Q14574 896 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 VITQ6UXI7 678 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 ILDR1Q86SU0 546 aaPredicted RBP15.02□□□□□ -0.01
HCFC1-201ENST00000310441 URM1Q9BTM9 101 aaKnown RBP15.02□□□□□ -0.01
HCFC1-201ENST00000310441 HES2Q9Y543 173 aa15.02□□□□□ -0.01
HCFC1-201ENST00000310441 VEGFDO43915 354 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 MT-CYBP00156 380 aaPredicted RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 OAS1P00973 400 aaKnown RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 FPR1P21462 350 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 GRIK2Q13002 908 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF169Q14929 603 aaPredicted RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 MROQ9BYG7 248 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 DNTTIP1Q9H147 329 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ZBTB26Q9HCK0 441 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 B4GALT7Q9UBV7 327 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 FZD10Q9ULW2 581 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 IQCF5A8MTL0 148 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 CDC7O00311 574 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 MT-ND1P03886 318 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 PROKR1Q8TCW9 393 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 CADM1Q9BY67 442 aaKnown RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 FOLH1BQ9HBA9 442 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 KLHL13Q9P2N7 655 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ENGP17813 658 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 DPYSL5Q9BPU6 564 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 J3QLW9 94 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 CAPN5O15484 640 aaPredicted RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF19P17023 458 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 IRF5Q13568 498 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 CGREF1Q99674 301 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 OSBPL2Q9H1P3 480 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 TOR1BO14657 336 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 RNF13O43567 381 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 XPNPEP2O43895 674 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 IL7P13232 177 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 GTF2F2P13984 249 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF598Q86UK7 904 aaKnown RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 SNX29P2Q8IUI4 249 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 ENAMQ9NRM1 1142 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 PTPN2P17706 415 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 BMP6P22004 513 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 SLC26A5P58743 744 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 NOGQ13253 232 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 TSTQ16762 297 aaKnown RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 RABL3Q5HYI8 236 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 PDE12Q6L8Q7 609 aaKnown RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 LIN37Q96GY3 246 aaPredicted RBP15.01□□□□□ -0.01
HCFC1-201ENST00000310441 PLEKHA3Q9HB20 300 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 TAS2R9Q9NYW1 312 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 HCN4Q9Y3Q4 1203 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 GXYLT2A0PJZ3 443 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 FTCDNL1E5RQL4 147 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 KLRC4O43908 158 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 IFNA17P01571 189 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 MALLQ13021 153 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 SLC36A3Q495N2 470 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 SLC7A8Q9UHI5 535 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 STXBP5LQ9Y2K9 1186 aa15.01□□□□□ -0.01
HCFC1-201ENST00000310441 CTSOP43234 321 aaPredicted RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 ZNF33AQ06730 810 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 CXCL9Q07325 125 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 ALDH16A1Q8IZ83 802 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 HOXB13Q92826 284 aaPredicted RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 ADAMTS10Q9H324 1103 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 METTL7AQ9H8H3 244 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 KCNS2Q9ULS6 477 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 EDDM13A0A1B0GTR0 161 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 AHSA1O95433 338 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 DPYSL2Q16555 572 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 APOBEC3HQ6NTF7 200 aaKnown RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 ERVK-18Q9QC07 812 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 CCL16O15467 120 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 RFPL1O75677 317 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 FAM155BO75949 473 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 CDRT1O95170 752 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 CYP1B1Q16678 543 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 HNRNPABQ99729 332 aaKnown RBP15□□□□□ -0.01
HCFC1-201ENST00000310441 MYOCQ99972 504 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 WDR18Q9BV38 432 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 ST6GALNAC4Q9H4F1 302 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 IRF2P14316 349 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 BDH1Q02338 343 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 SLBPQ14493 270 aaKnown RBP eCLIP15□□□□□ -0.01
HCFC1-201ENST00000310441 ARL6IP1Q15041 203 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 PXKQ7Z7A4 578 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 IL4I1Q96RQ9 567 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 VNN3Q9NY84 501 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 C2orf92A0A1B0GVN3 265 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 OR6C6A6NF89 314 aa15□□□□□ -0.01
HCFC1-201ENST00000310441 PIAS1O75925 651 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms