RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CACNG1Q06432 222 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 DUSP6Q16828 381 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 GFOD2Q3B7J2 385 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 HSF5Q4G112 596 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 KIF18BQ86Y91 864 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ANKRD13BQ86YJ7 626 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 GALNT13Q8IUC8 556 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TIGD4Q8IY51 512 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RASGEF1AQ8N9B8 481 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 DNAJB8Q8NHS0 232 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SNIP1Q8TAD8 396 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PSMG2Q969U7 264 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 KIAA1143Q96AT1 154 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 BIRC8Q96P09 236 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RGCCQ9H4X1 137 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ABCB8Q9NUT2 735 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ZNF358Q9NW07 568 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 OXSMQ9NWU1 459 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 WNK3Q9BYP7 1800 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 A0A0J9YVX5 310 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 A0A1B0GVC2 190 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 C2orf92A0A1B0GVN3 265 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SLC33A1O00400 549 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PIRO00625 290 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 WNT7AO00755 349 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SPARCP09486 303 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 NT5EP21589 574 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 NTSR1P30989 418 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ERVK-8P63133 956 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 CHIT1Q13231 466 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 CYP1B1Q16678 543 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SNAP47Q5SQN1 464 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SYVN1Q86TM6 617 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SLC7A5P1Q8MH63 180 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 C15orf40Q8WUR7 153 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MAELQ96JY0 434 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PPIL3Q9H2H8 161 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 SACM1LQ9NTJ5 587 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SLC17A6Q9P2U8 582 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MRTO4Q9UKD2 239 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 FARSAQ9Y285 508 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 HIF3AQ9Y2N7 669 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 PCDHGB7Q9Y5F8 929 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 CLCA1A8K7I4 914 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TTC34A8MYJ7 566 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RFPL1O75677 317 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RFPL2O75678 378 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 BCAS2O75934 225 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 KAT7O95251 611 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TYRP14679 529 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ARFRP1Q13795 201 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SCGB3A2Q96PL1 93 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MYOCQ99972 504 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RETREG1Q9H6L5 497 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 AKTIPQ9H8T0 292 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 LYARQ9NX58 379 aaKnown RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 FBXL12Q9NXK8 326 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TNFRSF10DQ9UBN6 386 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MYH1P12882 1939 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 NAV1Q8NEY1 1877 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TCRBV21S2A2A0A5A6 115 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SLC35F4A4IF30 521 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ELOA3DA6NLF2 546 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 RFXAPO00287 272 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 OXSR1O95747 527 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 HOXD8P13378 290 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 PRKACGP22612 351 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 HTR2AP28223 471 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 OR12D2P58182 307 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 MLF2Q15773 248 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 ELOA3BQ3SY89 546 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TCEAL6Q6IPX3 200 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 GKN2Q86XP6 184 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 CFAP52Q8N1V2 620 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ZNF676Q8N7Q3 588 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ELOA3Q8NG57 546 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SCRN2Q96FV2 425 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 KLHDC7BQ96G42 594 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 TMEM80Q96HE8 168 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 SLC35G5Q96KT7 338 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 DUSP26Q9BV47 211 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
VPS41-202ENST00000310301 TM9SF3Q9HD45 589 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 NANSQ9NR45 359 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 CALML5Q9NZT1 146 aa7.93□□□□□ -1.14
VPS41-202ENST00000310301 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 ADRA1BP35368 520 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 DSC2Q02487 901 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 AIMP2Q13155 320 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 RFTN1Q14699 578 aaPredicted RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 LY6G5CQ5SRR4 150 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 MTFR2Q6P444 385 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 LRRC70Q7Z2Q7 622 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 GPR149Q86SP6 731 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 IQCHQ86VS3 1027 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 NRSN1Q8IZ57 195 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ATP6V1C2Q8NEY4 427 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 NCSTNQ92542 709 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms