RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 WNT16Q9UBV4 365 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 BTNL2Q9UIR0 455 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CDV3Q9UKY7 258 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 BTBD3Q9Y2F9 522 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 IGHV1OR15-9A0A0B4J2B8 117 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GABRR3A8MPY1 467 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 FAM220BPB1ANY3 271 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 YY2O15391 372 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 CCNDBP1O95273 360 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 SP9P0CG40 484 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 LAMP1P11279 417 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 NCK1P16333 377 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GGT1P19440 569 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 RPL3P39023 403 aaKnown RBP11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GZMMP51124 257 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 DEPDC1Q5TB30 811 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 FAM71E1Q6IPT2 247 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 IKBIPQ70UQ0 350 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GPR155Q7Z3F1 870 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 PDSS2Q86YH6 399 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 TICAM1Q8IUC6 712 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 ADGRG5Q8IZF4 528 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 DTWD1Q8N5C7 304 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 ADCY4Q8NFM4 1077 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 TNIP2Q8NFZ5 429 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 OR2T12Q8NG77 320 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 OR2L3Q8NG85 312 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 CDC26Q8NHZ8 85 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 FAM174AQ8TBP5 190 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GPBAR1Q8TDU6 330 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 C16orf78Q8WTQ4 265 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 CANT1Q8WVQ1 401 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 MIEF2Q96C03 454 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 PRPF18Q99633 342 aaKnown RBP11.37□□□□□ -0.59
TRIM40-205ENST00000307859 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
TRIM40-205ENST00000307859 DUSP26Q9BV47 211 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 REEP4Q9H6H4 257 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
TRIM40-205ENST00000307859 PRM3Q9NNZ6 103 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 SLC6A20Q9NP91 592 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 AHSPQ9NZD4 102 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 OR6C2Q9NZP2 312 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 KLF15Q9UIH9 416 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
TRIM40-205ENST00000307859 SPTY2D1-AS1A0A0U1RR47 76 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 A0A1W2PPC4 97 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 FEZF1A0PJY2 475 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SAP18O00422 153 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 RNASET2O00584 256 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PLPP1O14494 284 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 CLEC3AO75596 197 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 TNFP01375 233 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 FURINP09958 794 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 UMPSP11172 480 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PSMA4P25789 261 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 GSTM2P28161 218 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SLC19A1P41440 591 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 LRRC74AQ0VAA2 488 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 ILF3Q12906 894 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 EIF2B5Q13144 721 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 UBXN2BQ14CS0 331 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SFT2D3Q587I9 215 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 MTX3Q5HYI7 312 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 CPTPQ5TA50 214 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 GLYATQ6IB77 296 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 ANKRD26P1Q6NSI1 321 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 AMIGO1Q86WK6 493 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SIX5Q8N196 739 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PAPD5Q8NDF8 572 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 TTLQ8NG68 377 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 OR52E4Q8NGH9 312 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 MTERF3Q96E29 417 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SHDQ96IW2 340 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PANX1Q96RD7 426 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SARGQ9BW04 601 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 BHLHE41Q9C0J9 482 aaPredicted RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 PIF1Q9H611 641 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 RPF2Q9H7B2 306 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 MRPS30Q9NP92 439 aaKnown RBP11.36□□□□□ -0.59
TRIM40-205ENST00000307859 TMEM184CQ9NVA4 438 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 SPHK1Q9NYA1 384 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 INVSQ9Y283 1065 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 LRCH1Q9Y2L9 728 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 DMXL1Q9Y485 3027 aa11.36□□□□□ -0.59
TRIM40-205ENST00000307859 FAM170BA6NMN3 283 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 NDUFS4O43181 175 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 OR1F1O43749 312 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 LCMT2O60294 686 aaKnown RBP11.35□□□□□ -0.59
TRIM40-205ENST00000307859 GSNP06396 782 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 KLK1P06870 262 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 CHRM5P08912 532 aaPredicted RBP11.35□□□□□ -0.59
TRIM40-205ENST00000307859 ZCCHC18P0CG32 403 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
TRIM40-205ENST00000307859 BSGP35613 385 aa11.35□□□□□ -0.59
TRIM40-205ENST00000307859 POLE2P56282 527 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms