RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 FIG4Q92562 907 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 CCDC177Q9NQR7 707 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 GPR83Q9NYM4 423 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RPS10-NUDT3A0A1W2PQS6 291 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PRAMEF27A3QJZ7 478 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HMX3A6NHT5 357 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HEPACAM2A8MVW5 462 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LEUTXA8MZ59 168 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SUPT3HB4E1H0 165 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LOC730098B7Z3J9 87 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PTGES3LE9PB15 166 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 H0YIV9 168 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 QSOX1O00391 747 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RAD51BO15315 384 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RGS14O43566 566 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PI15O43692 258 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HYAL3O43820 417 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 HS6ST1O60243 411 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF780AO75290 641 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 SCG5P05408 212 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 DGKAP23743 735 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 KDELR2P33947 212 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 GDF5P43026 501 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 CTSKP43235 329 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PRMT2P55345 433 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 CHRNB3Q05901 458 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS50-202ENST00000305866 PTPRNQ16849 979 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SLC35F1Q5T1Q4 408 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LIPJQ5W064 366 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ADNP2Q6IQ32 1131 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LRRC8DQ7L1W4 858 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HEATR4Q86WZ0 1026 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RNF130Q86XS8 419 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ADHFE1Q8IWW8 467 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HJURPQ8NCD3 748 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 OR4D11Q8NGI4 311 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF461Q8TAF7 563 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF675Q8TD23 568 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 GPR137Q96N19 417 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 RPRD1AQ96P16 312 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS50-202ENST00000305866 IL26Q9NPH9 171 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ITM2CQ9NQX7 267 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 TRMT13Q9NUP7 481 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 MARK1Q9P0L2 795 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 TRMT6Q9UJA5 497 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 SNX7Q9UNH6 387 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 A0A1W2PQ45 241 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 A0A1W2PQY0 241 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 C2orf78A6NCI8 922 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 C16orf96A6NNT2 1141 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PSIP1O75475 530 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 SEC24AO95486 1093 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ERGP11308 486 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 UBL4AP11441 157 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 NCF1P14598 390 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 HLA-DMAP28067 261 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 PCGF2P35227 344 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 LIM2P55344 173 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SEMG2Q02383 582 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SIM2Q14190 667 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 COX20Q5RI15 118 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 KLHL17Q6TDP4 642 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 GDPD4Q6W3E5 623 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 B3GNT7Q8NFL0 401 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZFAND1Q8TCF1 268 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 CREB3L4Q8TEY5 395 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 FCGR1BQ92637 280 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HTRA1Q92743 480 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 HSH2DQ96JZ2 352 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 OR4K3Q96R72 315 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 DPH2Q9BQC3 489 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 ZNF717Q9BY31 904 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 IPPKQ9H8X2 491 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ERVMER34-1Q9H9K5 563 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 C1GALT1Q9NS00 363 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 ABI2Q9NYB9 513 aaPredicted RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 LIMD1Q9UGP4 676 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 GINS2Q9Y248 185 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 GRIP1Q9Y3R0 1128 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 U3KQV3 271 aa5.23□□□□□ -1.57
VPS50-202ENST00000305866 SNRNP200O75643 2136 aaKnown RBP5.23□□□□□ -1.57
VPS50-202ENST00000305866 UBA6A0AVT1 1052 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 KRT87PA6NCN2 255 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 RFXAPO00287 272 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 LRRTM2O43300 516 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CSO75390 466 aaKnown RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 NDUFS3O75489 264 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 TGFB1P01137 390 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SLC4A1P02730 911 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SOD2P04179 222 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 STSP08842 583 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CYP4B1P13584 511 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 CTPS1P17812 591 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 MLLT3P42568 568 aaPredicted RBP5.22□□□□□ -1.57
VPS50-202ENST00000305866 PNLIPRP1P54315 467 aa5.22□□□□□ -1.57
VPS50-202ENST00000305866 SNRPGP62308 76 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms