RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DNAJB14Q8TBM8 379 aa24.95■■□□□ 1.58
CDKN2A-201ENST00000304494 BRIX1Q8TDN6 353 aaKnown RBP24.95■■□□□ 1.58
CDKN2A-201ENST00000304494 SEC16BQ96JE7 1060 aa24.95■■□□□ 1.58
CDKN2A-201ENST00000304494 PTBP2Q9UKA9 531 aaKnown RBP24.95■■□□□ 1.58
CDKN2A-201ENST00000304494 ASH1LQ9NR48 2969 aaKnown RBP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 WFS1O76024 890 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 UQCRHP07919 91 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 LTA4HP09960 611 aaKnown RBP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 TFEBP19484 476 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 JAK1P23458 1154 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 HSPA7P48741 367 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 STXBP1P61764 594 aaKnown RBP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 SLBPQ14493 270 aaKnown RBP eCLIP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 NOA1Q8NC60 698 aaKnown RBP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 OR5T3Q8NGG3 340 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 CREB3L4Q8TEY5 395 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 TBC1D20Q96BZ9 403 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 SNRNP40Q96DI7 357 aaKnown RBP24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 IMMP1LQ96LU5 166 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 ALG9Q9H6U8 611 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 NT5DC2Q9H857 520 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 NINJ2Q9NZG7 142 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 PTGFRNQ9P2B2 879 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 COPG2Q9UBF2 871 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 ACOT9Q9Y305 439 aa24.94■■□□□ 1.58
CDKN2A-201ENST00000304494 A0A087X1B8 175 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 FHP07954 510 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 HNF4AP41235 474 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 HYAL2Q12891 473 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 TLR1Q15399 786 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 PDK4Q16654 411 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 LANCL3Q6ZV70 420 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 ANKRD37Q7Z713 158 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 ISCA2Q86U28 154 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 CUZD1Q86UP6 607 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 SNX31Q8N9S9 440 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 PLPP5Q8NEB5 264 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 KIF18AQ8NI77 898 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 PSMF1Q92530 271 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 EXT2Q93063 718 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 RBCK1Q9BYM8 510 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 NUDT4Q9NZJ9 180 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 DMGDHQ9UI17 866 aaKnown RBP24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 PCDHGA10Q9Y5H3 936 aa24.93■■□□□ 1.58
CDKN2A-201ENST00000304494 DYTNA2CJ06 578 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 MAGEB17A8MXT2 336 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 CHST10O43529 356 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 KERAO60938 352 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 SEC24DO94855 1032 aaPredicted RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 HPDP32754 393 aaPredicted RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 SOX11P35716 441 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 GLRBP48167 497 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 RAB8AP61006 207 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 DLG1Q12959 904 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 UBAP2LQ14157 1087 aaKnown RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 ABRAXAS2Q15018 415 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 NSDHLQ15738 373 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 TOR1AIP1Q5JTV8 583 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 MROH9Q5TGP6 573 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 B3GNTL1Q67FW5 361 aaPredicted RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 SHISA5Q8N114 240 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 CISD2Q8N5K1 135 aaKnown RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 IFT81Q8WYA0 676 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 MRRFQ96E11 262 aaKnown RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 PTCD3Q96EY7 689 aaKnown RBP24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 CNDP1Q96KN2 507 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 FMO2Q99518 471 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 ACSS3Q9H6R3 686 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 LANCL2Q9NS86 450 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 IGSF5Q9NSI5 407 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 CSAG2Q9Y5P2 127 aa24.92■■□□□ 1.58
CDKN2A-201ENST00000304494 CCDC189A1A4V9 331 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 CCNT2O60583 730 aaKnown RBP24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 CDC123O75794 336 aaPredicted RBP24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 SMIM10L1P0DMW3 83 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 GNLYP22749 145 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 OLR1P78380 273 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 RHAGQ02094 409 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 ZNF169Q14929 603 aaPredicted RBP24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 UAP1Q16222 522 aaPredicted RBP24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 FAM83EQ2M2I3 478 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 FBXO48Q5FWF7 155 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 PLAG1Q6DJT9 500 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 LRRC70Q7Z2Q7 622 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 FAM26EQ8N5C1 309 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 SIRT6Q8N6T7 355 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 ESAMQ96AP7 390 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 SMIM10Q96HG1 83 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 CD244Q9BZW8 370 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 KLHL31Q9H511 634 aa24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 COPG1Q9Y678 874 aaKnown RBP24.91■■□□□ 1.58
CDKN2A-201ENST00000304494 DOCK10Q96BY6 2186 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 IGHV3-20A0A0C4DH32 117 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 OR2W5A6NFC9 320 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 ANKDD1BA6NHY2 528 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 SYCE1LA8MT33 242 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 SUPT3HB4E1H0 165 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 PSMD12O00232 456 aaPredicted RBP24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 SUPT3HO75486 399 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms