RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 CST11Q9H112 138 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 MAGIXQ9H6Y5 334 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 FBRSL1Q9HCM7 1045 aaKnown RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 CNOT11Q9UKZ1 510 aaKnown RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 PCDHGB6Q9Y5F9 930 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 SNNO75324 88 aaPredicted RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 LEFTY1O75610 366 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 SLC6A6P31641 620 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 EIF4HQ15056 248 aaKnown RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 EZH1Q92800 747 aaPredicted RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 RAD9AQ99638 391 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 TOR1BO14657 336 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 DGKEP52429 567 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 PON3Q15166 354 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 MAPK14Q16539 360 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 RNF130Q86XS8 419 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 PROKR2Q8NFJ6 384 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 TAS2R9Q9NYW1 312 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 MKL2Q9ULH7 1088 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 C9J4A7 227 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 H3BSA7 217 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 TEX46H3BTG2 121 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 STC2O76061 302 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 TIA1P31483 386 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 OR2B6P58173 313 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 PITX1P78337 314 aaPredicted RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 SYT16Q17RD7 645 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 KLHL26Q53HC5 615 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 CLEC12AQ5QGZ9 265 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 OR4E2Q8NGC2 313 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 GRHL3Q8TE85 626 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 ERMAPQ96PL5 475 aaPredicted RBP12.36□□□□□ -0.43
PTCD1-201ENST00000292478 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 HAPLN2Q9GZV7 340 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 MEMO1Q9Y316 297 aa12.36□□□□□ -0.43
PTCD1-201ENST00000292478 SNAPC5O75971 98 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF20P17024 532 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 HOXC12P31275 282 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 DIO3P55073 304 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CDH11P55287 796 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TSTQ16762 297 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 SCML4Q8N228 414 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TMEM98Q9Y2Y6 226 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 A0A1W2PRG6 482 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 OR1I1O60431 355 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 F8A1P23610 371 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PREPP48147 710 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 NRIP1P48552 1158 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TSPAN5P62079 268 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 COLEC12Q5KU26 742 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 C12orf40Q86WS4 652 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 BHLHE41Q9C0J9 482 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CLDND1Q9NY35 253 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 WRBO00258 174 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 SLC10A3P09131 477 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 EDNRAP25101 427 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TMBIM6P55061 237 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CREB5Q02930 508 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CSTF1Q05048 431 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PUS10Q3MIT2 529 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ZNF366Q8N895 744 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PMEPA1Q969W9 287 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 ADAD1Q96M93 576 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 KCNK6Q9Y257 313 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PCDHGA10Q9Y5H3 936 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TIAM2Q8IVF5 1701 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 OR14I1A6ND48 311 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 FAAHO00519 579 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PDYNP01213 254 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 MAPK3P27361 379 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 HMGCLP35914 325 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 VMACQ2NL98 169 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 BLOC1S3Q6QNY0 202 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CDHR3Q6ZTQ4 885 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 KBTBD6Q86V97 674 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 CEP97Q8IW35 865 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 PLA2G15Q8NCC3 412 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 DNAJA4Q8WW22 397 aaPredicted RBP12.35□□□□□ -0.43
PTCD1-201ENST00000292478 TRIB2Q92519 343 aa12.35□□□□□ -0.43
PTCD1-201ENST00000292478 DOHHQ9BU89 302 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms