RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CLCQ05315 142 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 NKG7Q16617 165 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 GGTA1PQ4G0N0 100 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 GPR155Q7Z3F1 870 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 OR9A4Q8NGU2 314 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 OR2Y1Q8NGV0 311 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 ZCCHC10Q8TBK6 192 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 ZNF473Q8WTR7 871 aaKnown RBP25.52■■□□□ 1.68
SSU72-201ENST00000291386 C12orf65Q9H3J6 166 aaKnown RBP25.52■■□□□ 1.68
SSU72-201ENST00000291386 SEMA4BQ9NPR2 832 aaPredicted RBP25.52■■□□□ 1.68
SSU72-201ENST00000291386 OXSMQ9NWU1 459 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 MAP4K5Q9Y4K4 846 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 ACTL7BQ9Y614 415 aa25.52■■□□□ 1.68
SSU72-201ENST00000291386 DSPP15924 2871 aaKnown RBP25.52■■□□□ 1.68
SSU72-201ENST00000291386 LRIT2A6NDA9 550 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 TYROBPO43914 113 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 GALR3O60755 368 aaPredicted RBP25.51■■□□□ 1.67
SSU72-201ENST00000291386 SUPT7LO94864 414 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 OTCP00480 354 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 IL1RNP18510 177 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 SKP1P63208 163 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 CDC20Q12834 499 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 CASP8Q14790 479 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 ADNP2Q6IQ32 1131 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 PRSS41Q7RTY9 318 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 EXOC3L1Q86VI1 746 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 PDSS2Q86YH6 399 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 PPP4R1Q8TF05 950 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 GAL3ST3Q96A11 431 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 REPS1Q96D71 796 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 SPSB2Q99619 263 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 TGIF2Q9GZN2 237 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 KLHL31Q9H511 634 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 CLK4Q9HAZ1 481 aaKnown RBP25.51■■□□□ 1.67
SSU72-201ENST00000291386 ZNF282Q9UDV7 671 aaPredicted RBP25.51■■□□□ 1.67
SSU72-201ENST00000291386 RNF11Q9Y3C5 154 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 SCN3AQ9NY46 2000 aa25.51■■□□□ 1.67
SSU72-201ENST00000291386 KLHL18O94889 574 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 ZNF888P0CJ79 500 aaPredicted RBP25.5■■□□□ 1.67
SSU72-201ENST00000291386 H2AFXP16104 143 aaPredicted RBP25.5■■□□□ 1.67
SSU72-201ENST00000291386 CREB1P16220 341 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 PIK3CBP42338 1070 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 CDH13P55290 713 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 UGT8Q16880 541 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 TOR1AIP1Q5JTV8 583 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 RPS27LQ71UM5 84 aaKnown RBP25.5■■□□□ 1.67
SSU72-201ENST00000291386 MILR1Q7Z6M3 343 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 CCDC63Q8NA47 563 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 WDR20Q8TBZ3 569 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 TCP10LQ8TDR4 215 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 ADAMTS17Q8TE56 1095 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 MS4A6EQ96DS6 147 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 MKKSQ9NPJ1 570 aaPredicted RBP25.5■■□□□ 1.67
SSU72-201ENST00000291386 ARGLU1Q9NWB6 273 aaPredicted RBP25.5■■□□□ 1.67
SSU72-201ENST00000291386 PSD3Q9NYI0 1048 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 CTSFQ9UBX1 484 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 STK38LQ9Y2H1 464 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 NAALAD2Q9Y3Q0 740 aa25.5■■□□□ 1.67
SSU72-201ENST00000291386 SPAG7O75391 227 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 HNRNPH1P31943 449 aaKnown RBP25.49■■□□□ 1.67
SSU72-201ENST00000291386 FOLR3P41439 243 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 OCA2Q04671 838 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 SSPNQ14714 243 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 C10orf62Q5T681 223 aaPredicted RBP25.49■■□□□ 1.67
SSU72-201ENST00000291386 MYLK4Q86YV6 388 aaPredicted RBP25.49■■□□□ 1.67
SSU72-201ENST00000291386 ARMC2Q8NEN0 867 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 OR4F6Q8NGB9 312 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 STT3BQ8TCJ2 826 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 TRPC4APQ8TEL6 797 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 CCT6BQ92526 530 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 CATSPER2Q96P56 530 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 CDK15Q96Q40 435 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 MS4A8Q9BY19 250 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 C14orf105Q9NVL8 296 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 SLC17A7Q9P2U7 560 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 PPT2Q9UMR5 302 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 PTRH2Q9Y3E5 179 aaKnown RBP25.49■■□□□ 1.67
SSU72-201ENST00000291386 CACNA1BQ00975 2339 aa25.49■■□□□ 1.67
SSU72-201ENST00000291386 SGK494L7N484 410 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 PPP6CO00743 305 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 MLYCDO95822 493 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 PCNAP12004 261 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 IL10RAQ13651 578 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 ERV3-1Q14264 604 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 PCLAFQ15004 111 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 RBBP7Q16576 425 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 CPSF6Q16630 551 aaKnown RBP eCLIP25.48■■□□□ 1.67
SSU72-201ENST00000291386 LIPMQ5VYY2 423 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 OR2L5Q8NG80 312 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 HUS1BQ8NHY5 278 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 NACC2Q96BF6 587 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 FAM111AQ96PZ2 611 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 ZNF382Q96SR6 550 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 REXO4Q9GZR2 422 aaKnown RBP25.48■■□□□ 1.67
SSU72-201ENST00000291386 GSTO2Q9H4Y5 243 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 TRPC4Q9UBN4 977 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 TRPS1Q9UHF7 1281 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 ZNF225Q9UK10 706 aa25.48■■□□□ 1.67
SSU72-201ENST00000291386 A0A1B0GTL3 188 aa25.47■■□□□ 1.67
SSU72-201ENST00000291386 C4orf51C9J302 202 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms