RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SMIM24O75264 130 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 ALOX12BO75342 701 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 BMP10O95393 424 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 B3GALT4O96024 378 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 ACPPP15309 386 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 GSTM2P28161 218 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 PGDP52209 483 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 STXBP1P61764 594 aaKnown RBP23.79■■□□□ 1.4
PDF-201ENST00000288022 RAPSNQ13702 412 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 NAA30Q147X3 362 aaPredicted RBP23.79■■□□□ 1.4
PDF-201ENST00000288022 TUBB8Q3ZCM7 444 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 MINDY4Q4G0A6 757 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 NIPAL1Q6NVV3 410 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 ASB18Q6ZVZ8 466 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 AFAP1L2Q8N4X5 818 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 PTGR2Q8N8N7 351 aaPredicted RBP23.79■■□□□ 1.4
PDF-201ENST00000288022 KLHL31Q9H511 634 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 ATP13A2Q9NQ11 1180 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.79■■□□□ 1.4
PDF-201ENST00000288022 TNPO3Q9Y5L0 923 aaKnown RBP23.79■■□□□ 1.4
PDF-201ENST00000288022 V9GYY5 206 aaPredicted RBP23.79■■□□□ 1.4
PDF-201ENST00000288022 SCN3AQ9NY46 2000 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 LRRC14BA6NHZ5 514 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 K7EM74 188 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 JRKO75564 520 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 SHBGP04278 402 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 CD22P20273 847 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 VSNL1P62760 191 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 HYAL2Q12891 473 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 TBCCQ15814 346 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 MYLK4Q86YV6 388 aaPredicted RBP23.78■■□□□ 1.4
PDF-201ENST00000288022 FDCSPQ8NFU4 85 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 OR11G2Q8NGC1 345 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 OR5T3Q8NGG3 340 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 C8orf44Q96CB5 159 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 PHF21BQ96EK2 531 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 PEX11GQ96HA9 241 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 SEC16BQ96JE7 1060 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 MRPL57Q9BQC6 102 aaKnown RBP23.78■■□□□ 1.4
PDF-201ENST00000288022 MRPL46Q9H2W6 279 aaKnown RBP23.78■■□□□ 1.4
PDF-201ENST00000288022 COPG2Q9UBF2 871 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 ZNF490Q9ULM2 529 aaPredicted RBP23.78■■□□□ 1.4
PDF-201ENST00000288022 TMCO1Q9UM00 188 aa23.78■■□□□ 1.4
PDF-201ENST00000288022 PCDHGA9Q9Y5G4 932 aaKnown RBP23.78■■□□□ 1.4
PDF-201ENST00000288022 NUP210LQ5VU65 1888 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 CLEC3AO75596 197 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 SIX3O95343 332 aaPredicted RBP23.77■■□□□ 1.4
PDF-201ENST00000288022 OLR1P78380 273 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 PCBP2Q15366 365 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDF-201ENST00000288022 ADNP2Q6IQ32 1131 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 SHISA5Q8N114 240 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 CNPY4Q8N129 248 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 UBE2E3Q969T4 207 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 FAR2Q96K12 515 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 MESP1Q9BRJ9 268 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 RBCK1Q9BYM8 510 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 GPR83Q9NYM4 423 aa23.77■■□□□ 1.4
PDF-201ENST00000288022 SMIM23A6NLE4 172 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 GOLGA8RI6L899 631 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 CEACAM4O75871 244 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 PCNAP12004 261 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 EEF1DP29692 281 aaKnown RBP23.76■■□□□ 1.39
PDF-201ENST00000288022 CASP2P42575 452 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 SLCO1A2P46721 670 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 EEF1A2Q05639 463 aaKnown RBP23.76■■□□□ 1.39
PDF-201ENST00000288022 AIMP2Q13155 320 aaKnown RBP23.76■■□□□ 1.39
PDF-201ENST00000288022 GTF2H2Q13888 395 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 GTF2H2CQ6P1K8 395 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 MED27Q6P2C8 311 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 PRICKLE2Q7Z3G6 844 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 ZNF605Q86T29 641 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 GALNT16Q8N428 558 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 METTL21AQ8WXB1 218 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 GAL3ST3Q96A11 431 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 NUDT9Q9BW91 350 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 ACTR8Q9H981 624 aa23.76■■□□□ 1.39
PDF-201ENST00000288022 ERI3O43414 337 aaKnown RBP23.75■■□□□ 1.39
PDF-201ENST00000288022 CHST10O43529 356 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 WFS1O76024 890 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 PDGFAP04085 211 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 ITGA3P26006 1051 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 HNRNPH1P31943 449 aaKnown RBP23.75■■□□□ 1.39
PDF-201ENST00000288022 HPDP32754 393 aaPredicted RBP23.75■■□□□ 1.39
PDF-201ENST00000288022 ARL1P40616 181 aaPredicted RBP23.75■■□□□ 1.39
PDF-201ENST00000288022 PIK3CGP48736 1102 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 BTN3A2P78410 334 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 GOLGA7Q7Z5G4 137 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 VN1R5Q7Z5H4 357 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 VN1R1Q9GZP7 353 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 AICDAQ9GZX7 198 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 RHBGQ9H310 441 aa23.75■■□□□ 1.39
PDF-201ENST00000288022 A0A0G2JN53 185 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 LRIT2A6NDA9 550 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 C4orf51C9J302 202 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 CDC123O75794 336 aaPredicted RBP23.74■■□□□ 1.39
PDF-201ENST00000288022 C8orf89P0DMQ9 161 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 SMIM10L1P0DMW3 83 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 PYGBP11216 843 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 IL10P22301 178 aa23.74■■□□□ 1.39
PDF-201ENST00000288022 HSD17B3P37058 310 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms