RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CGB2Q6NT52 195 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 CHSY3Q70JA7 882 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 PPP1R3BQ86XI6 285 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 WDR36Q8NI36 951 aaKnown RBP16.38■□□□□ 0.21
SKP2-201ENST00000274254 SMIM10Q96HG1 83 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 F2RL3Q96RI0 385 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 KLHL31Q9H511 634 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 SLC12A4Q9UP95 1085 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 HYKKA2RU49 373 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 PMS2P1A4D2B8 440 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 TRPC5OSA6NMA1 111 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 POLR1CO15160 346 aaPredicted RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 RGS14O43566 566 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 RSL1D1O76021 490 aaKnown RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 RAB15P59190 212 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 TBL3Q12788 808 aaKnown RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 TOR1AIP1Q5JTV8 583 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 UBE3DQ7Z6J8 389 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 OR2L5Q8NG80 312 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 UTP15Q8TED0 518 aaKnown RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 GAL3ST3Q96A11 431 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 C11orf24Q96F05 449 aaPredicted RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 MAELQ96JY0 434 aaKnown RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 C10orf90Q96M02 699 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 TRIM55Q9BYV6 548 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 IRAK4Q9NWZ3 460 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 SLC39A1Q9NY26 324 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 SATB2Q9UPW6 733 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
SKP2-201ENST00000274254 SLC22A7Q9Y694 548 aa16.37■□□□□ 0.21
SKP2-201ENST00000274254 ATP6AP2A0A1C7CYW4 349 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 URADA6NGE7 173 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 SRRM3A6NNA2 597 aaPredicted RBP16.36■□□□□ 0.21
SKP2-201ENST00000274254 C4orf51C9J302 202 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 PLPP1O14494 284 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 SDHDO14521 159 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 LSM1O15116 133 aaKnown RBP16.36■□□□□ 0.21
SKP2-201ENST00000274254 SH3BGRLO75368 114 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 ATP6AP2O75787 350 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 MED26O95402 600 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 TIAF1O95411 115 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 JMJD7P0C870 316 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 ARFIP1P53367 373 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 FAM53BQ14153 422 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 IMPG1Q17R60 797 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
SKP2-201ENST00000274254 VWA5B1Q5TIE3 1220 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 PRAMEF17Q5VTA0 474 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 YOD1Q5VVQ6 348 aaPredicted RBP16.36■□□□□ 0.21
SKP2-201ENST00000274254 ABHD17CQ6PCB6 329 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 EPGNQ6UW88 154 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 MARCH9Q86YJ5 346 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 SRFBP1Q8NEF9 429 aaKnown RBP16.36■□□□□ 0.21
SKP2-201ENST00000274254 PPP1R36Q96LQ0 422 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 CTRCQ99895 268 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 SIKE1Q9BRV8 207 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 CENPKQ9BS16 269 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 ZNF717Q9BY31 904 aaPredicted RBP16.36■□□□□ 0.21
SKP2-201ENST00000274254 PRM3Q9NNZ6 103 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 LHX9Q9NQ69 397 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 PCDHGA8Q9Y5G5 932 aa16.36■□□□□ 0.21
SKP2-201ENST00000274254 SAP18O00422 153 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 ZNF749O43361 778 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ERI3O43414 337 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 PRR35P0CG20 571 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ZNF888P0CJ79 500 aaPredicted RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 TROVE2P10155 538 aaKnown RBP eCLIP16.35■□□□□ 0.21
SKP2-201ENST00000274254 DRD4P21917 467 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 AQP5P55064 265 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 KIAA0040Q15053 153 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 NDUFA9Q16795 377 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 MUM1Q2TAK8 710 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 FAM214AQ32MH5 1076 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 C3orf38Q5JPI3 329 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ABHD13Q7L211 337 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 METTL4Q8N3J2 472 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TTC29Q8NA56 475 aaPredicted RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 RFWD2Q8NHY2 731 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 CHTF18Q8WVB6 975 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 STON2Q8WXE9 905 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PMEPA1Q969W9 287 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 RGMAQ96B86 450 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 METTL2AQ96IZ6 378 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 KCNC2Q96PR1 638 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TAAR9Q96RI9 348 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 DDA1Q9BW61 102 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 MRPL1Q9BYD6 325 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 RIC8BQ9NVN3 520 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PISDQ9UG56 409 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 SRPK3Q9UPE1 567 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 PCDHB3Q9Y5E6 796 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 VPS4BO75351 444 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ALOX12P18054 663 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 TSFMP43897 325 aaKnown RBP16.35■□□□□ 0.21
SKP2-201ENST00000274254 PLA2G16P53816 162 aa16.35■□□□□ 0.21
SKP2-201ENST00000274254 ARSFP54793 590 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms