RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HLA-CQ95604 372 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 CXXC1Q9P0U4 656 aaPredicted RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 C19orf25Q9UFG5 118 aaPredicted RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 HEXBP07686 556 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 BCKDHAP12694 445 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 ANXA8P13928 327 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 TIMP2P16035 220 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 TIA1P31483 386 aaKnown RBP eCLIP13.23□□□□□ -0.29
NPC1-201ENST00000269228 XKP51811 444 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 LHX8Q68G74 356 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 DPPA4Q7L190 304 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 RFKQ969G6 155 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 THSD7AQ9UPZ6 1657 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 KNL1Q8NG31 2342 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 PAPPAQ13219 1627 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CASKO14936 926 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 TLX3O43711 291 aaPredicted RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 MPZL2O60487 215 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 KCNC1P48547 511 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 SGCBQ16585 318 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CSNK1A1LQ8N752 337 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 SUN3Q8TAQ9 357 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ARRDC2Q8TBH0 407 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 PHOSPHO1Q8TCT1 267 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 AURKBQ96GD4 344 aaPredicted RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 STRADBQ9C0K7 418 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CREG1O75629 220 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CAPGP40121 348 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 CLEC12AQ5QGZ9 265 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 UNC5DQ6UXZ4 953 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ZDHHC1Q8WTX9 485 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 RIT1Q92963 219 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ABLIM3O94929 683 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 DIRAS1O95057 198 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 H1F0P07305 194 aaKnown RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 RCVRNP35243 200 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CCINQ13939 588 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ZFAND4Q86XD8 727 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 TOE1Q96GM8 510 aaKnown RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 WDR45Q9Y484 360 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 ABCA3Q99758 1704 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 EVPLQ92817 2033 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 OR2B3O76000 313 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 GSTT1P30711 240 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 MTTPP55157 894 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 CXorf57Q6NSI4 855 aaKnown RBP13.22□□□□□ -0.29
NPC1-201ENST00000269228 Q6ZSR6 202 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 HUS1BQ8NHY5 278 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 OAZ3Q9UMX2 235 aa13.22□□□□□ -0.29
NPC1-201ENST00000269228 KLKB1P03952 638 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 IGFBP6P24592 240 aaPredicted RBP13.21□□□□□ -0.29
NPC1-201ENST00000269228 ITGADQ13349 1161 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 OR5AR1Q8NGP9 310 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 FAM155AB1AL88 458 aaPredicted RBP13.21□□□□□ -0.29
NPC1-201ENST00000269228 PDLIM1O00151 329 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 GPR39O43194 453 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 PTGES3Q15185 160 aaKnown RBP13.21□□□□□ -0.29
NPC1-201ENST00000269228 OR2T5Q6IEZ7 315 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 ZNF433Q8N7K0 673 aaPredicted RBP13.21□□□□□ -0.29
NPC1-201ENST00000269228 OR4K17Q8NGC6 315 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 OR2T29Q8NH02 315 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 CD200R1Q8TD46 325 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 ACTL8Q9H568 366 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 FTSJ1Q9UET6 329 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 LAMB1P07942 1786 aa13.21□□□□□ -0.29
NPC1-201ENST00000269228 OR52A4PA6NMU1 304 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 CAPN14A8MX76 684 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 HHLA1C9JL84 531 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 MAGEB3O15480 346 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 FHP07954 510 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 CXCL12P48061 93 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 PLGLB1Q02325 96 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 CATSPEREQ5SY80 951 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 OR10H4Q8NGA5 316 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 OR6K6Q8NGW6 343 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 HSH2DQ96JZ2 352 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 AMBNQ9NP70 447 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 ACTR3BQ9P1U1 418 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 NENFQ9UMX5 172 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 PGRMC2O15173 223 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 CHST10O43529 356 aa13.21□□□□□ -0.3
NPC1-201ENST00000269228 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.37e-7■■■■□ 19.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms