RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 HLCSP50747 726 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 AP1S2P56377 157 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 IL2P60568 153 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 CSHL1Q14406 222 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 ZNF662Q6ZS27 426 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 STRA8Q7Z7C7 330 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 PDSS2Q86YH6 399 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
COMMD4-201ENST00000267935 ABHD11Q8NFV4 315 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 ASB5Q8WWX0 329 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 SDCCAG3Q96C92 435 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 SNF8Q96H20 258 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 SERPINB12Q96P63 405 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-201ENST00000267935 NPAS2Q99743 824 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 SARGQ9BW04 601 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 LZTFL1Q9NQ48 299 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 IARS2Q9NSE4 1012 aaKnown RBP13.34□□□□□ -0.27
COMMD4-201ENST00000267935 ARL15Q9NXU5 204 aa13.34□□□□□ -0.27
COMMD4-201ENST00000267935 ZNF860A6NHJ4 632 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TFECO14948 347 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-201ENST00000267935 NME2P1O60361 137 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 NME2P22392 152 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TRHRP34981 398 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-201ENST00000267935 PTGS2P35354 604 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 MLF1P58340 268 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TLE4Q04727 773 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 DEFB134Q4QY38 66 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 ANKRD22Q5VYY1 191 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 PAOXQ6QHF9 649 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 MEX3BQ6ZN04 569 aaKnown RBP13.33□□□□□ -0.28
COMMD4-201ENST00000267935 SIAH3Q8IW03 269 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TRPV3Q8NET8 790 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 OR4K1Q8NGD4 311 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TSLPQ969D9 159 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TRIM51Q9BSJ1 452 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 TRIM45Q9H8W5 580 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-201ENST00000267935 MCCC2Q9HCC0 563 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 ZFP69BQ9UJL9 534 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 ADAMTS6Q9UKP5 1117 aa13.33□□□□□ -0.28
COMMD4-201ENST00000267935 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 MAN1A2O60476 641 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 TTC4O95801 387 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 RNH1P13489 461 aaKnown RBP13.32□□□□□ -0.28
COMMD4-201ENST00000267935 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-201ENST00000267935 CXCR5P32302 372 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 AHRP35869 848 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 ST13P50502 369 aaKnown RBP13.32□□□□□ -0.28
COMMD4-201ENST00000267935 SNRPNP63162 240 aaKnown RBP13.32□□□□□ -0.28
COMMD4-201ENST00000267935 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 TMEM156Q8N614 296 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 ZNF740Q8NDX6 193 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 OR5T3Q8NGG3 340 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 LINGO1Q96FE5 620 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 ENKD1Q9H0I2 346 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 PRDM9Q9NQV7 894 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 DYRK1BQ9Y463 629 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 F8P00451 2351 aa13.32□□□□□ -0.28
COMMD4-201ENST00000267935 NRDCO43847 1150 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 TPOP07202 933 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 PGAM1P18669 254 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 CLCN2P51788 898 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 ITGA8P53708 1063 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 KIAA0408Q6ZU52 694 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 CDH24Q86UP0 819 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 PPIL6Q8IXY8 311 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 KIF2BQ8N4N8 673 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 CPSF7Q8N684 471 aaKnown RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 C2CD4AQ8NCU7 369 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 FAM57AQ8TBR7 257 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 GRK7Q8WTQ7 553 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 SLC5A11Q8WWX8 675 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 FAR2Q96K12 515 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 PBKQ96KB5 322 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 SIGLEC10Q96LC7 697 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 DMRTA2Q96SC8 542 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 NDNQ99608 321 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 CCDC77Q9BR77 488 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 TIMMDC1Q9NPL8 285 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 IGSF5Q9NSI5 407 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 NCOA6Q14686 2063 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-201ENST00000267935 C2CD3Q4AC94 2353 aa13.31□□□□□ -0.28
COMMD4-201ENST00000267935 A0A1B0GTH9 108 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SYNDIG1LA6NDD5 238 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SAGE2PA6NJ88 616 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 CLDN4O14493 209 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms