RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RAB10P61026 200 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ATP6V0D1P61421 351 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 SKP1P63208 163 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 SLC7A5Q01650 507 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 CKAP4Q07065 602 aaKnown RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 HYAL2Q12891 473 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ZKSCAN8Q15776 578 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 B3GNTL1Q67FW5 361 aaPredicted RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 SLCO4C1Q6ZQN7 724 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ABHD13Q7L211 337 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ANKRD37Q7Z713 158 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 TMPRSS11BQ86T26 416 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 PPM1NQ8N819 430 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 OR5T3Q8NGG3 340 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 UTP15Q8TED0 518 aaKnown RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 FBF1Q8TES7 1133 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 CREB3L4Q8TEY5 395 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 SMIM10Q96HG1 83 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 LRRC1Q9BTT6 524 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 CAPS2Q9BXY5 557 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 SLC6A16Q9GZN6 736 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 CLK4Q9HAZ1 481 aaKnown RBP15.16■□□□□ 0.02
USE1-201ENST00000263897 AGPAT4Q9NRZ5 378 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 LANCL2Q9NS86 450 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 PLA2G3Q9NZ20 509 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 ICE1Q9Y2F5 2266 aa15.16■□□□□ 0.02
USE1-201ENST00000263897 COL12A1Q99715 3063 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 NAV2Q8IVL1 2488 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 DYTNA2CJ06 578 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 URADA6NGE7 173 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 FAM155BO75949 473 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 SEC24DO94855 1032 aaPredicted RBP15.15■□□□□ 0.02
USE1-201ENST00000263897 SERPINA6P08185 405 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 HNF4AP41235 474 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 RHAGQ02094 409 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 CDC16Q13042 620 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 NR6A1Q15406 480 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 OR4D1Q15615 310 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 NSDHLQ15738 373 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 PLAG1Q6DJT9 500 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 RPUSD3Q6P087 351 aaKnown RBP15.15■□□□□ 0.02
USE1-201ENST00000263897 TCAIMQ8N3R3 496 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 OR1N1Q8NGS0 311 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 KIAA1191Q96A73 305 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 TBC1D20Q96BZ9 403 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 PSMG3-AS1Q96PY0 264 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 KLHL31Q9H511 634 aa15.15■□□□□ 0.02
USE1-201ENST00000263897 ZGRF1Q86YA3 2104 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 ESYT3A0FGR9 886 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 MAGEB17A8MXT2 336 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 SEMA7AO75326 666 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 URI1O94763 535 aaPredicted RBP15.14■□□□□ 0.01
USE1-201ENST00000263897 AGFG2O95081 481 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 FHP07954 510 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 STX2P32856 288 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 KCNC1P48547 511 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 TNFSF10P50591 281 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 RAB8AP61006 207 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 ARG2P78540 354 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 NAB1Q13506 487 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 ABRAXAS2Q15018 415 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 BTBD16Q32M84 506 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 SULT1C3Q6IMI6 304 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 TMIGD1Q6UXZ0 262 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 PRR7Q8TB68 274 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
USE1-201ENST00000263897 TMEM79Q9BSE2 394 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 NT5DC2Q9H857 520 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 CNOT10Q9H9A5 744 aaKnown RBP15.14■□□□□ 0.01
USE1-201ENST00000263897 ZDHHC18Q9NUE0 388 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 DNAJC11Q9NVH1 559 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 STMN3Q9NZ72 180 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 WWOXQ9NZC7 414 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 GPRC5BQ9NZH0 403 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 CD274Q9NZQ7 290 aa15.14■□□□□ 0.01
USE1-201ENST00000263897 PTBP2Q9UKA9 531 aaKnown RBP15.14■□□□□ 0.01
USE1-201ENST00000263897 ANKUB1A6NFN9 424 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 STK16O75716 305 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 CDC123O75794 336 aaPredicted RBP15.13■□□□□ 0.01
USE1-201ENST00000263897 UQCRHP07919 91 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 JAK1P23458 1154 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 OLR1P78380 273 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 ACTN3Q08043 901 aaPredicted RBP15.13■□□□□ 0.01
USE1-201ENST00000263897 SLBPQ14493 270 aaKnown RBP eCLIP15.13■□□□□ 0.01
USE1-201ENST00000263897 WHAMMP3Q1A5X7 153 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 SFT2D3Q587I9 215 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 TOR1AIP1Q5JTV8 583 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 ABHD17BQ5VST6 288 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 H3F3CQ6NXT2 135 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 KRT78Q8N1N4 520 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 TTLQ8NG68 377 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 STAG3L4Q8TBR4 150 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 M1APQ8TC57 530 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 GRHL3Q8TE85 626 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 FAR1Q8WVX9 515 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 ESAMQ96AP7 390 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 RBCK1Q9BYM8 510 aa15.13■□□□□ 0.01
USE1-201ENST00000263897 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
USE1-201ENST00000263897 AICDAQ9GZX7 198 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms