RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TUSC1Q2TAM9 212 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 TIGD3Q6B0B8 471 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 AHSA2Q719I0 299 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 TMC8Q8IU68 726 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 LIX1LQ8IVB5 337 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 LIX1Q8N485 282 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 KLHL15Q96M94 604 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 ZSWIM3Q96MP5 696 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 ACBD6Q9BR61 282 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 BOCQ9BWV1 1114 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 C1QTNF6Q9BXI9 259 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 ADAM30Q9UKF2 790 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 ACAD8Q9UKU7 415 aa13.69□□□□□ -0.22
SCARF1-201ENST00000263071 A0A1W2PQ09 198 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 PRMT5O14744 637 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CHRM5P08912 532 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 FDXRP22570 491 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CTSKP43235 329 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 NUDT6P53370 316 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CDC42EP1Q00587 391 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 HES5Q5TA89 166 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 LAMTOR1Q6IAA8 161 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 Q6ZPB1 254 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 NLRP8Q86W28 1048 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 MYDGFQ969H8 173 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 SLC38A4Q969I6 547 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 LINC00052Q96N35 136 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 PELOQ9BRX2 385 aaKnown RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CIPCQ9C0C6 399 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 RNF167Q9H6Y7 350 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 RLFQ13129 1914 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 LOC100130705A0A1B0GUX0 176 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 F5H5T6 163 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 M0R129 80 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 GLUD1P00367 558 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ALPLP05186 524 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ATXN1LP0C7T5 689 aaKnown RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 PFKLP17858 780 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 HK3P52790 923 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 KCNC3Q14003 757 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 NKG7Q16617 165 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 TATDN3Q17R31 274 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 KANK2Q63ZY3 851 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 FAM180BQ6P0A1 224 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 MSANTD2Q6P1R3 559 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CLRN3Q8NCR9 226 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ASB15Q8WXK1 588 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 BARD1Q99728 777 aaKnown RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 NPAS1Q99742 590 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 CHCHD6Q9BRQ6 235 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ARNT2Q9HBZ2 717 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 PAK6Q9NQU5 681 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 TLR9Q9NR96 1032 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 MBD2Q9UBB5 411 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 RNF6Q9Y252 685 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 SLC45A1Q9Y2W3 748 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ZFP37Q9Y6Q3 630 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 B4GALT3O60512 393 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 GADD45AP24522 165 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 AKT1P31749 480 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 TAF1CQ15572 869 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 ZNF782Q6ZMW2 699 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 GPALPP1Q8IXQ4 340 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 KATNBL1Q9H079 304 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 TTYH1Q9H313 450 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 AIG1Q9NVV5 245 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 MCUBQ9NWR8 336 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 SARDHQ9UL12 918 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 DNMT3AQ9Y6K1 912 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-201ENST00000263071 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
SCARF1-201ENST00000263071 DOCK3Q8IZD9 2030 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 EFCAB10A6NFE3 127 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 GATCO43716 136 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 KERAO60938 352 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 RPS17P08708 135 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 HSD17B1P14061 328 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 Q6ZSR9 355 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 ZNF621Q6ZSS3 439 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 OR52N1Q8NH53 320 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 TRIM54Q9BYV2 358 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 C3orf18Q9UK00 162 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 ELF5Q9UKW6 265 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 FCF1Q9Y324 198 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 RRASP10301 218 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 UROSP10746 265 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 HTTP42858 3142 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 GATMP50440 423 aa13.67□□□□□ -0.22
SCARF1-201ENST00000263071 AHCYL2Q96HN2 611 aaKnown RBP13.67□□□□□ -0.22
SCARF1-201ENST00000263071 DPH2Q9BQC3 489 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms