RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 OR4K1Q8NGD4 311 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 OR8S1Q8NH09 359 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 EPYCQ99645 322 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
COL8A1-201ENST00000261037 C13orf42A0A1B0GVH6 325 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 PRAMEF11O60813 436 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 ITIH1P19827 911 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 GSTM3P21266 225 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 STK19P49842 368 aaPredicted RBP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 VSX2P58304 361 aaPredicted RBP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF678Q5SXM1 525 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 CCDC80Q76M96 950 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 PQLC3Q8N755 202 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 OR9A1PQ8NGU1 263 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 KCNH6Q9H252 994 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 HPF1Q9NWY4 346 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 FXYD6-FXYD2A0A087WZ82 144 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 COCHO43405 550 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 FHP07954 510 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 APLP1P51693 650 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 STC1P52823 247 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 PRMT2P55345 433 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 AP1S2P56377 157 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 SLC15A3Q8IY34 581 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 SLC7A6OSQ96CW6 309 aaPredicted RBP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 OR8D2Q9GZM6 311 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 FXYD6Q9H0Q3 95 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 TPT1P8Q9HAU6 139 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 FKBP14Q9NWM8 211 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 SRRDQ9UH36 339 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 FBXO9Q9UK97 447 aaPredicted RBP11.71□□□□□ -0.54
COL8A1-201ENST00000261037 TEX264Q9Y6I9 313 aa11.71□□□□□ -0.54
COL8A1-201ENST00000261037 C11orf98E9PRG8 122 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 H3BSA7 217 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ENTPD6O75354 484 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 LEFTY1O75610 366 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 RCBTB2O95199 551 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SRPRAP08240 638 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 CLRN1P58418 232 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 GALNT2Q10471 571 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TMED4Q7Z7H5 227 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 GPAT4Q86UL3 456 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF227Q86WZ6 799 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PLD6Q8N2A8 252 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 OR56A1Q8NGH5 318 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SLC22A8Q8TCC7 542 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 MAPK15Q8TD08 544 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PTTG2Q9NZH5 202 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 OR6C70A6NIJ9 312 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 H7BY64 318 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 GRID2O43424 1007 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 DEFA5Q01523 94 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF267Q14586 743 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 CYBRD1Q53TN4 286 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 CARD17Q5XLA6 110 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 MFSD2AQ8NA29 543 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 THAP3Q8WTV1 239 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PRAP1Q96NZ9 151 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 GPR22Q99680 433 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 FAM72CH0Y354 149 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PLD2O14939 933 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TBX10O75333 385 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 OAS1P00973 400 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SLC6A4P31645 630 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 RPL6Q02878 288 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ST3GAL3Q11203 375 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SERINC3Q13530 473 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 OCLNQ16625 522 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PLEKHG6Q3KR16 790 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 FAM72AQ5TYM5 149 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 FAM72DQ6L9T8 149 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 FAM72BQ86X60 149 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 KRTCAP2Q8N6L1 136 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ZBTB8BQ8NAP8 495 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 C2CD4AQ8NCU7 369 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 OR6N1Q8NGY5 312 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ZBTB26Q9HCK0 441 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 FBRSL1Q9HCM7 1045 aaKnown RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TRIM36Q9NQ86 728 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 GABRQQ9UN88 632 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PSAT1Q9Y617 370 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 EDNRBP24530 442 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 CDH11P55287 796 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM115Q12893 351 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TPRG1LQ5T0D9 272 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PYHIN1Q6K0P9 492 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 KCTD9Q7L273 389 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PLEKHO2Q8TD55 490 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-201ENST00000261037 PSKH2Q96QS6 385 aa11.7□□□□□ -0.54
COL8A1-201ENST00000261037 BEX2Q9BXY8 128 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms