RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 FAM129CQ86XR2 697 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 NXPE1Q8N323 547 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 TM9SF2Q99805 663 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 MTIF3Q9H2K0 278 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 RRAGCQ9HB90 399 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 TRIM36Q9NQ86 728 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 FARSBQ9NSD9 589 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CPQQ9Y646 472 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 RGPD2P0DJD1 1756 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR1F1O43749 312 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF767PQ75MW2 155 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 OSTM1Q86WC4 334 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 HDDC3Q8N4P3 179 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 C2CD4AQ8NCU7 369 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 RPLP0P6Q8NHW5 317 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 GRHL3Q8TE85 626 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 HYLS1Q96M11 299 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF649Q9BS31 505 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR2S2Q9NQN1 319 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 SOHLH2Q9NX45 425 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 LOC730098B7Z3J9 87 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 OAZ2O95190 189 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 TGFB1P01137 390 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ALAS2P22557 587 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 LRP8Q14114 963 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 PUM1Q14671 1186 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 SF1Q15637 639 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF778Q96MU6 729 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ANKRD60Q9BZ19 345 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 MOCS1Q9NZB8 636 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ANKMY1Q9P2S6 941 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 POU2F3Q9UKI9 436 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CD8B2A6NJW9 211 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 SNNO75324 88 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ALPPP05187 535 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 LCKP06239 509 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CD8BP10966 210 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 RPL17P18621 184 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 GALNT2Q10471 571 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 VARS2Q5ST30 1063 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 FBXL22Q6P050 247 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CRTC1Q6UUV9 634 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 PM20D2Q8IYS1 436 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 COQ8BQ96D53 544 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 NDC1Q9BTX1 674 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 XYLT2Q9H1B5 865 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 MANSC4A6NHS7 340 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 MTX2O75431 263 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 GBAP04062 536 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 AGXTP21549 392 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 SSTR4P31391 388 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 GRIA2P42262 883 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 MLLT1Q03111 559 aaPredicted RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 PYHIN1Q6K0P9 492 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 GJD3Q8N144 294 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 CLDN19Q8N6F1 224 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 C5orf34Q96MH7 638 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 ZNF558Q96NG5 402 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 POT1Q9NUX5 634 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 TMEM39AQ9NV64 488 aa9.44□□□□□ -0.9
CTDSPL2-201ENST00000260327 PCDH17O14917 1159 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SLC19A2O60779 497 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TFPIP10646 304 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CHMP24386 653 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CDK6Q00534 326 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NTRK2Q16620 822 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CHERPQ8IWX8 916 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 METTL25Q8N6Q8 603 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAPK15Q8TD08 544 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 FRS2Q8WU20 508 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NXPE2Q96DL1 559 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 RDH12Q96NR8 316 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TRMT61BQ9BVS5 477 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 OR51I1Q9H343 314 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PLEKHA1Q9HB21 404 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 CNOT11Q9UKZ1 510 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PLSCR1O15162 318 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 MAP3K8P41279 467 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 DPY19L1Q2PZI1 675 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 TBC1D25Q3MII6 688 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 XKR4Q5GH76 650 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 PDZD9Q8IXQ8 264 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 C1orf52Q8N6N3 182 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 RIPOR3Q96MK2 946 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 HTATIP2Q9BUP3 242 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 GNG8Q9UK08 70 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SH2B3Q9UQQ2 575 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 RNF11Q9Y3C5 154 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 MRPL3P09001 348 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 NSG1P42857 185 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 E2F1Q01094 437 aa9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 AIMP2Q13155 320 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SFRP4Q6FHJ7 346 aaPredicted RBP9.43□□□□□ -0.9
CTDSPL2-201ENST00000260327 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms