RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SLC6A19Q695T7 634 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 IGFL3Q6UXB1 125 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 TMIGD1Q6UXZ0 262 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 CCDC91Q7Z6B0 441 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 Q8NA96 180 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 PEX11GQ96HA9 241 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 SMIM10Q96HG1 83 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 THOC3Q96J01 351 aaKnown RBP21.68■■□□□ 1.06
LSM4-201ENST00000252816 PAFAH2Q99487 392 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 RBCK1Q9BYM8 510 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 CD244Q9BZW8 370 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 LHPPQ9H008 270 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 COPG2Q9UBF2 871 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 PLAAQ9Y263 795 aa21.68■■□□□ 1.06
LSM4-201ENST00000252816 PRRC2CQ9Y520 2896 aaKnown RBP21.67■■□□□ 1.06
LSM4-201ENST00000252816 NSG1A0A0A6YYJ2 146 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 CCNT2O60583 730 aaKnown RBP21.67■■□□□ 1.06
LSM4-201ENST00000252816 KLHL41O60662 606 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 SERPINA6P08185 405 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 INHBAP08476 426 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 RHOXF2BP0C7M4 288 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 C8orf89P0DMQ9 161 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 TYK2P29597 1187 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 GLRBP48167 497 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 SERPINB8P50452 374 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 KCNC4Q03721 635 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 PCOLCEQ15113 449 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 MFSD4BQ5TF39 518 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 LANCL3Q6ZV70 420 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 ABHD13Q7L211 337 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 IFT20Q8IY31 132 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 WDR34Q96EX3 536 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 GPR78Q96P69 363 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 RHOXF2Q9BQY4 288 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 ZNF700Q9H0M5 742 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 EHD1Q9H4M9 534 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 LANCL2Q9NS86 450 aa21.67■■□□□ 1.06
LSM4-201ENST00000252816 TTLL8A6PVC2 850 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 PCDH17O14917 1159 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 CLGNO14967 610 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 CHST10O43529 356 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 KLHL2O95198 593 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 CELA2AP08217 269 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 CD22P20273 847 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 MAGEA12P43365 314 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 DOC2AQ14183 400 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 FAM83EQ2M2I3 478 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 XKR6Q5GH73 641 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 TOR1AIP1Q5JTV8 583 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 ADNP2Q6IQ32 1131 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 LRRC70Q7Z2Q7 622 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 VN1R5Q7Z5H4 357 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 KRT78Q8N1N4 520 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 PLD6Q8N2A8 252 aaKnown RBP21.66■■□□□ 1.06
LSM4-201ENST00000252816 RHEBL1Q8TAI7 183 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 UBTD2Q8WUN7 234 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 ISL2Q96A47 359 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 PNPLA2Q96AD5 504 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 NT5DC2Q9H857 520 aa21.66■■□□□ 1.06
LSM4-201ENST00000252816 ZNF490Q9ULM2 529 aaPredicted RBP21.66■■□□□ 1.06
LSM4-201ENST00000252816 IGHV3-20A0A0C4DH32 117 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 POC1B-GALNT4F8VUJ3 575 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 CDC123O75794 336 aaPredicted RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 TBX6O95947 436 aaPredicted RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 CYC1P08574 325 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 PRR35P0CG20 571 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 HNRNPH1P31943 449 aaKnown RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 RHAGQ02094 409 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 ACAP2Q15057 778 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 PLEKHN1Q494U1 663 aaPredicted RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 AGAP7PQ5VUJ5 663 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 IRAK1BP1Q5VVH5 260 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 KBTBD2Q8IY47 623 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 TTLQ8NG68 377 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 DCAKDQ8WVC6 231 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 METTL21AQ8WXB1 218 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 MIB2Q96AX9 1013 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 PTCD3Q96EY7 689 aaKnown RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 AGAP4Q96P64 663 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 OR1F2PQ96R84 312 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 PITHD1Q9GZP4 211 aaPredicted RBP21.65■■□□□ 1.06
LSM4-201ENST00000252816 VPS11Q9H270 941 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 RIC8BQ9NVN3 520 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 CSAG2Q9Y5P2 127 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 RELNP78509 3460 aa21.65■■□□□ 1.06
LSM4-201ENST00000252816 A0A087WUV0 522 aaPredicted RBP21.64■■□□□ 1.05
LSM4-201ENST00000252816 LRIT2A6NDA9 550 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 URADA6NGE7 173 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 FAM153BP0C7A2 387 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 IL10P22301 178 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 MSH2P43246 934 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 SERPINB9P50453 376 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 SKP1P63208 163 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 CHIT1Q13231 466 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 FAM153CQ494X1 144 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 PRR30Q53SZ7 412 aaPredicted RBP21.64■■□□□ 1.05
LSM4-201ENST00000252816 IGFL2Q6UWQ7 119 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 CCT6BQ92526 530 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 PSMF1Q92530 271 aa21.64■■□□□ 1.05
LSM4-201ENST00000252816 TBC1D20Q96BZ9 403 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms