RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 RPS14P62263 151 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 RPA4Q13156 261 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 MBLAC2Q68D91 279 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 NUDT13Q86X67 352 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 HAS1Q92839 578 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PGM2Q96G03 612 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PELOQ9BRX2 385 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 NMUR2Q9GZQ4 415 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 BCAS1O75363 584 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 ANXA3P12429 323 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 CCNCP24863 283 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 MALLQ13021 153 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 KLF10Q13118 480 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 LASP1Q14847 261 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 EXOC3L2Q2M3D2 409 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 RBM15BQ8NDT2 890 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 CPT1BQ92523 772 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 OSTF1Q92882 214 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 HSPA12BQ96MM6 686 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 TMEM185BQ9H7F4 350 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ZNF175Q9Y473 711 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ECM29Q5VYK3 1845 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ZNF860A6NHJ4 632 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 DUSP11O75319 330 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 ABHD2P08910 425 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ZNF14P17017 642 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 HOXB9P17482 250 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 PRKD1Q15139 912 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PRELID2Q8N945 189 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 GCDHQ92947 438 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 SUV39H2Q9H5I1 410 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ACSS3Q9H6R3 686 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 GTF3C1Q12789 2109 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 NTRK3Q16288 839 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 HSPBAP1Q96EW2 488 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PITX2Q99697 317 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 BORCS7-ASMTA0A0B4J1R7 106 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 K7EPI3 171 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ATP1B2P14415 290 aaPredicted RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 TYRP14679 529 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ETV5P41161 510 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 ABRAXAS2Q15018 415 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 TIGD4Q8IY51 512 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 OR9K2Q8NGE7 335 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 GEMIN6Q8WXD5 167 aaKnown RBP12.81□□□□□ -0.36
NEK9-201ENST00000238616 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
NEK9-201ENST00000238616 PFKLP17858 780 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 CHMP24386 653 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 GRPRP30550 384 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 ZC3H14Q6PJT7 736 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 IGFN1Q86VF2 1251 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 ERI1Q8IV48 349 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 POC1BQ8TC44 478 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 MND1Q9BWT6 205 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 KCNK6Q9Y257 313 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 H7C417 338 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 CLIC1O00299 241 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 INPPL1O15357 1258 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 DIRAS1O95057 198 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 CHRNA1P02708 482 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 COL6A2P12110 1019 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 IDH3AP50213 366 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 IRF5Q13568 498 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 RUNX2Q13950 521 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 TEAD2Q15562 447 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 ECM1Q16610 540 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 PGAM4Q8N0Y7 254 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 GALNT15Q8N3T1 639 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 CLEC4CQ8WTT0 213 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 ARL5BQ96KC2 179 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 HEATR5BQ9P2D3 2071 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 EDNRBP24530 442 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 UBE2NP61088 152 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 HMGCS1Q01581 520 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 OR10G2Q8NGC3 310 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 FCAMRQ8WWV6 532 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 FAM118AQ9NWS6 357 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 RPL36Q9Y3U8 105 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 AGR2O95994 175 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 IFNA7P01567 189 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 HOXB6P17509 224 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 RBMS1P29558 406 aaKnown RBP12.8□□□□□ -0.36
NEK9-201ENST00000238616 KCNC4Q03721 635 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 FRS2Q8WU20 508 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 LRRC58Q96CX6 371 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 LHX5Q9H2C1 402 aa12.8□□□□□ -0.36
NEK9-201ENST00000238616 TM9SF3Q9HD45 589 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms