RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TMEM5Q9Y2B1 443 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF487B1APH4 448 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 GPR32O75388 356 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 G6PDP11413 515 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 NR4A1P22736 598 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 SOX4Q06945 474 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 FCHO2Q0JRZ9 810 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 TMEM225Q6GV28 225 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 NPLQ9BXD5 320 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 UCK2Q9BZX2 261 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 SNTG1Q9NSN8 517 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 PCDHGA3Q9Y5H0 932 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 IGLON5A6NGN9 336 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 OR2B3O76000 313 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ENDOUP21128 410 aaKnown RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 EMX2Q04743 252 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ABHD18Q0P651 414 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 MRPL49Q13405 166 aaKnown RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 PON2Q15165 354 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 C1orf94Q6P1W5 598 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 UTS2BQ765I0 119 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 OR4C15Q8NGM1 316 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ASB6Q9NWX5 421 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ZDHHC2Q9UIJ5 367 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ARPC2O15144 300 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 SLC16A5O15375 505 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 TGM5O43548 720 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ITGA5P08648 1049 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 SLC6A6P31641 620 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF550Q7Z398 422 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 PLEKHO2Q8TD55 490 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 KCNC2Q96PR1 638 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 CDCA3Q99618 268 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 G6PC3Q9BUM1 346 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 HHATLQ9HCP6 504 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 AMBNQ9NP70 447 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 TRIM64A6NGJ6 449 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 TMEM233B4DJY2 109 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 CDC123O75794 336 aaPredicted RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 CA3P07451 260 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 CTSAP10619 480 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 UFM1P61960 85 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 IRF5Q13568 498 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 RAB33AQ14088 237 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 TESCQ96BS2 214 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 PELOQ9BRX2 385 aaKnown RBP18.31■□□□□ 0.52
SMPD3-201ENST00000219334 CXorf21Q9HAI6 301 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 TEX264Q9Y6I9 313 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 EFCAB9A8MZ26 197 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 PCDHB16Q9NRJ7 776 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF878C9JN71 531 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 EIF1AYO14602 144 aaKnown RBP18.3■□□□□ 0.52
SMPD3-201ENST00000219334 C1GALT1C1LP0DN25 315 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 OR4D2P58180 307 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 USP53Q70EK8 1073 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 AKAP14Q86UN6 197 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FAM3CQ92520 227 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 IGSF8Q969P0 613 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 ORAI3Q9BRQ5 295 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 ZDHHC18Q9NUE0 388 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 EI24O14681 340 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 CBFA2T3O75081 653 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 MPC1LP0DKB6 136 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 CYBAP13498 195 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 ACSL1P33121 698 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FLYWCH1Q4VC44 716 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 LIPJQ5W064 366 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 DGLUCYQ7Z3D6 616 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 PLXDC1Q8IUK5 500 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 JAGN1Q8N5M9 183 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 TM9SF2Q99805 663 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 TPSD1Q9BZJ3 242 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 COMMD3Q9UBI1 195 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FBXO9Q9UK97 447 aaPredicted RBP18.3■□□□□ 0.52
SMPD3-201ENST00000219334 MYADML2A6NDP7 307 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FABP12A6NFH5 140 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 C17orf99Q6UX52 265 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 HSDL2Q6YN16 418 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 GPAT4Q86UL3 456 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 ACOT12Q8WYK0 555 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 SLC2A13Q96QE2 648 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 PEBP4Q96S96 227 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 REEP4Q9H6H4 257 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 DNMT3AQ9Y6K1 912 aaPredicted RBP18.3■□□□□ 0.52
SMPD3-201ENST00000219334 COL1A1P02452 1464 aaPredicted RBP18.3■□□□□ 0.52
SMPD3-201ENST00000219334 RNF13O43567 381 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 HCRTR2O43614 444 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 IFI30P13284 250 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FMO3P31513 532 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 SPANXN4Q5MJ08 99 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 TMPRSS9Q7Z410 1059 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 MAPKAP1Q9BPZ7 522 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
SMPD3-201ENST00000219334 A0A1B0GVI7 797 aa18.29■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF99A8MXY4 864 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms