RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GABREP78334 506 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ZNF33BQ06732 778 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 MANEAQ5SRI9 462 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 CEACAM20Q6UY09 585 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 TRIM46Q7Z4K8 759 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 WDR75Q8IWA0 830 aaKnown RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 DTWD1Q8N5C7 304 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 OR2T11Q8NH01 316 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ZNF317Q96PQ6 595 aaPredicted RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 TAAR9Q96RI9 348 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 SLC7A5P2Q9GIP4 190 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 CUTCQ9NTM9 273 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 SPTBP11277 2137 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ATP6AP2A0A1C7CYW4 349 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 HDAC3O15379 428 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ATP6AP2O75787 350 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 B3GALT4O96024 378 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 RAP1GDS1P52306 607 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ADPRMQ3LIE5 342 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 DEPDC1Q5TB30 811 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ARHGEF39Q8N4T4 335 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 C3orf30Q96M34 536 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 C17orf62Q9BQA9 187 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 CENPKQ9BS16 269 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 MRPL1Q9BYD6 325 aaKnown RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ACTR5Q9H9F9 607 aaPredicted RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 POLR1BQ9H9Y6 1135 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ENAMQ9NRM1 1142 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 DHCR7Q9UBM7 475 aaKnown RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 VTI1BQ9UEU0 232 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 KLK13Q9UKR3 277 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 PPT2Q9UMR5 302 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 USH1CQ9Y6N9 552 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 KNTC1P50748 2209 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 SPTBN2O15020 2390 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 URADA6NGE7 173 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 SLCO1B7G3V0H7 640 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 SLC28A1O00337 649 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 TNFSF15O95150 251 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 SPINK2P20155 84 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 CUL3Q13618 768 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 SPDYAQ5MJ70 313 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 VWA5B1Q5TIE3 1220 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 TTLL10Q6ZVT0 673 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 ABHD13Q7L211 337 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 MAVSQ7Z434 540 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 HOMEZQ8IX15 550 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 OR2L5Q8NG80 312 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 UTP15Q8TED0 518 aaKnown RBP25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 GAL3ST3Q96A11 431 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 CHMP6Q96FZ7 201 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 VPS29Q9UBQ0 182 aa25.91■■□□□ 1.74
CHMP4B-201ENST00000217402 SERTM1A2A2V5 107 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 RTCAO00442 366 aaKnown RBP25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 RGS14O43566 566 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 NTRK1P04629 796 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 ATXN8OSP0DMR3 200 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 IL1RNP18510 177 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 SEC24CP53992 1094 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 NR6A1Q15406 480 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 NDUFA9Q16795 377 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 MUM1Q2TAK8 710 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 FAM214AQ32MH5 1076 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 DEFB134Q4QY38 66 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 TMEM35AQ53FP2 167 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 XKR7Q5GH72 579 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 TRIM40Q6P9F5 258 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 RNF165Q6ZSG1 346 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 PRSS41Q7RTY9 318 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 METTL27Q8N6F8 245 aaPredicted RBP25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 DDA1Q9BW61 102 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 SORBS1Q9BX66 1292 aaKnown RBP25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 NPHS2Q9NP85 383 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 PSD3Q9NYI0 1048 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 GIMAP2Q9UG22 337 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 NDOR1Q9UHB4 597 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 PCDHGA8Q9Y5G5 932 aa25.9■■□□□ 1.74
CHMP4B-201ENST00000217402 ZNF28P17035 718 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 ALAS2P22557 587 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 HK2P52789 917 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 GARNL3Q5VVW2 1013 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 Q6ZSR9 355 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 UBE3DQ7Z6J8 389 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 CLIP3Q96DZ5 547 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 ASPSCR1Q9BZE9 553 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 ULBP3Q9BZM4 244 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 PFDN4Q9NQP4 134 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 NMRK1Q9NWW6 199 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 SRPK3Q9UPE1 567 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 CCL27Q9Y4X3 112 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 PCDHB3Q9Y5E6 796 aa25.89■■□□□ 1.74
CHMP4B-201ENST00000217402 C9orf172C9J069 976 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 PLPP1O14494 284 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 KIAA0754O94854 1291 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ALOX12P18054 663 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 GCGRP47871 477 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 ARSFP54793 590 aa25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 SF3A3Q12874 501 aaKnown RBP eCLIP25.88■■□□□ 1.73
CHMP4B-201ENST00000217402 TMEM164Q5U3C3 297 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms