RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 C19orf25Q9UFG5 118 aaPredicted RBP23.52■■□□□ 1.36
TSR3-201ENST00000007390 MTRF1LQ9UGC7 380 aaKnown RBP23.52■■□□□ 1.36
TSR3-201ENST00000007390 DMGDHQ9UI17 866 aaKnown RBP23.52■■□□□ 1.36
TSR3-201ENST00000007390 PTBP2Q9UKA9 531 aaKnown RBP23.52■■□□□ 1.36
TSR3-201ENST00000007390 PCDHGA10Q9Y5H3 936 aa23.52■■□□□ 1.36
TSR3-201ENST00000007390 SHANK1Q9Y566 2161 aa23.52■■□□□ 1.36
TSR3-201ENST00000007390 CNTRLQ7Z7A1 2325 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 H2AFYO75367 372 aaKnown RBP23.51■■□□□ 1.35
TSR3-201ENST00000007390 ICAM2P13598 275 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 AGTR2P50052 363 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 MFSD4BQ5TF39 518 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 TMIGD1Q6UXZ0 262 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 RAPH1Q70E73 1250 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 CCDC91Q7Z6B0 441 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 OR5T3Q8NGG3 340 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 STAG3L4Q8TBR4 150 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 SNRNP40Q96DI7 357 aaKnown RBP23.51■■□□□ 1.35
TSR3-201ENST00000007390 NT5DC2Q9H857 520 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 NMRAL1Q9HBL8 299 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 NINJ2Q9NZG7 142 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 CD274Q9NZQ7 290 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 RNF112Q9ULX5 631 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 CSAG2Q9Y5P2 127 aa23.51■■□□□ 1.35
TSR3-201ENST00000007390 STK16O75716 305 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 CTAGE8P0CG41 777 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 SMIM10L1P0DMW3 83 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 PHBP35232 272 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 RHAGQ02094 409 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 DLG1Q12959 904 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 SLBPQ14493 270 aaKnown RBP eCLIP23.5■■□□□ 1.35
TSR3-201ENST00000007390 GLE1Q53GS7 698 aaKnown RBP23.5■■□□□ 1.35
TSR3-201ENST00000007390 LANCL3Q6ZV70 420 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 CPEB2Q7Z5Q1 589 aaKnown RBP23.5■■□□□ 1.35
TSR3-201ENST00000007390 TBC1D1Q86TI0 1168 aaPredicted RBP23.5■■□□□ 1.35
TSR3-201ENST00000007390 ISCA2Q86U28 154 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 CTAGE4Q8IX94 777 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 PLPP5Q8NEB5 264 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 BRIX1Q8TDN6 353 aaKnown RBP23.5■■□□□ 1.35
TSR3-201ENST00000007390 TBC1D20Q96BZ9 403 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 PEX11GQ96HA9 241 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 SMIM10Q96HG1 83 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 FUT8Q9BYC5 575 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 SLC29A3Q9BZD2 475 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 ACSS3Q9H6R3 686 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 ALG9Q9H6U8 611 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 SCN3AQ9NY46 2000 aa23.5■■□□□ 1.35
TSR3-201ENST00000007390 CHST10O43529 356 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 S100BP04271 92 aaPredicted RBP23.49■■□□□ 1.35
TSR3-201ENST00000007390 FHP07954 510 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 LTA4HP09960 611 aaKnown RBP23.49■■□□□ 1.35
TSR3-201ENST00000007390 TFEBP19484 476 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 GMPRP36959 345 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 KCNC1P48547 511 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 HSPA7P48741 367 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 B3GNTL1Q67FW5 361 aaPredicted RBP23.49■■□□□ 1.35
TSR3-201ENST00000007390 LINC00696Q6ZRV3 163 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 ANKRD37Q7Z713 158 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.49■■□□□ 1.35
TSR3-201ENST00000007390 KRT78Q8N1N4 520 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 DNAJB14Q8TBM8 379 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 WDR34Q96EX3 536 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 ATOH8Q96SQ7 321 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 IGSF5Q9NSI5 407 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 NUDT4Q9NZJ9 180 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 ACOT9Q9Y305 439 aa23.49■■□□□ 1.35
TSR3-201ENST00000007390 CCDC189A1A4V9 331 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 HMX2A2RU54 273 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 MAGEB17A8MXT2 336 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 KERAO60938 352 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 B3GALT4O96024 378 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 CELA2AP08217 269 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 GNLYP22749 145 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 JAK1P23458 1154 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 TSFMP43897 325 aaKnown RBP23.48■■□□□ 1.35
TSR3-201ENST00000007390 UQCRFS1P47985 274 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 RAB8AP61006 207 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 UBAP2LQ14157 1087 aaKnown RBP23.48■■□□□ 1.35
TSR3-201ENST00000007390 TLR1Q15399 786 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 PDK4Q16654 411 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 PLAG1Q6DJT9 500 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 CISD2Q8N5K1 135 aaKnown RBP23.48■■□□□ 1.35
TSR3-201ENST00000007390 BARD1Q99728 777 aaKnown RBP23.48■■□□□ 1.35
TSR3-201ENST00000007390 RBCK1Q9BYM8 510 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 AICDAQ9GZX7 198 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 KLHL31Q9H511 634 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 PTGFRNQ9P2B2 879 aa23.48■■□□□ 1.35
TSR3-201ENST00000007390 A0A087X1B8 175 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 OR2W5A6NFC9 320 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 CLGNO14967 610 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 PRAMEF4O60810 478 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 DNAJB6O75190 326 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 WFS1O76024 890 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 SEC24DO94855 1032 aaPredicted RBP23.47■■□□□ 1.35
TSR3-201ENST00000007390 ITGAMP11215 1152 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 HNF4AP41235 474 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 STXBP1P61764 594 aaKnown RBP23.47■■□□□ 1.35
TSR3-201ENST00000007390 OLR1P78380 273 aa23.47■■□□□ 1.35
TSR3-201ENST00000007390 SRSF1Q07955 248 aaKnown RBP eCLIP23.47■■□□□ 1.35
TSR3-201ENST00000007390 ZNF169Q14929 603 aaPredicted RBP23.47■■□□□ 1.35
TSR3-201ENST00000007390 ABRAXAS2Q15018 415 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms