RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Camk1Q91YS8 374 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Coro6Q920M5 471 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Prmt3Q922H1 532 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 DlstQ9D2G2 454 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Spata19Q9DAQ9 154 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fut2Q9JL27 347 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21488A0A087WR99 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm20911A0A087WSS0 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Kiaa1522A2A7S8 1013 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm14139F6ZS36 494 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr618K7N6B3 318 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Bmp4P21275 408 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ccr7P47774 378 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ptchd1Q14B62 888 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Grm5Q3UVX5 1203 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Il10raQ61727 575 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ddx51Q6P9R1 639 aaKnown RBP9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ap3s2Q8BSZ2 193 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tmem252Q8C353 183 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Irak3Q8K4B2 609 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1487Q8VFQ6 315 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr48Q8VGN4 301 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mrgpra1Q91WW5 304 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Krcc1Q99JT5 256 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Metap1dQ9CPW9 335 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 4931417E11RikQ9CR05 305 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 9030624G23RikQ9D308 155 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Clic3Q9D7P7 237 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Lmx1aQ9JKU8 382 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fbxw5Q9QXW2 573 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nfs1Q9Z1J3 459 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MycsQ9Z304 431 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ZxdbA2CE44 873 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Clip3B9EHT4 547 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zar1lC3VD30 291 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Psmd4O35226 376 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cxcl12P40224 93 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Syt4P40749 425 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Taf1aP97357 453 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cpt1aP97742 773 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gpr15Q0VDU3 360 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nt5eQ61503 576 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ssr4Q62186 172 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ap5m1Q8BJ63 490 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Znf385bQ8BXJ8 482 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cars2Q8BYM8 551 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr683Q8VGV1 319 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 B4galt3Q91YY2 395 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Exosc4Q921I9 245 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cyp2u1Q9CX98 530 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp773Q9CZ29 471 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tlr4Q9QUK6 835 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tubd1Q9R1K7 455 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Phrf1A6H619 1682 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r-ps130A0A140T8U3 855 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm8906L7N2A2 181 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GzmkO35205 263 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ppm1bP36993 390 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 RykQ01887 594 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mocs1Q5RKZ7 636 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sim1Q61045 765 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Nadsyn1Q711T7 725 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Znf750Q8BH05 703 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sephs1Q8BH69 392 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 NarfQ9CYQ7 462 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ndufv2Q9D6J6 248 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GnmtQ9QXF8 293 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slco1a1Q9QXZ6 670 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21497A0A087WRK3 222 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ndufaf6A2AIL4 333 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Esp31A8R0W3 114 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Znf382B2RXC5 579 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp949E9Q732 603 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r52L7N2B2 852 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Capn5O08688 640 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Myf6P15375 242 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zp2P20239 713 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tia1P52912 386 aaKnown RBP9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm732Q3V0P9 516 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GkQ64516 559 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 DgkbQ6NS52 802 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 S100a15aQ6S5I3 108 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mon1bQ8BMQ8 553 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 CenpxQ8C4X1 78 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Piwil4Q8CGT6 848 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Scara5Q8K299 491 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Isoc1Q91V64 297 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 BniplQ99JU7 328 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Clcc1Q99LI2 539 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Arl4dQ99PE9 201 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Atp13a2Q9CTG6 1169 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tas2r119Q9JKT2 335 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rai2Q9QVY8 529 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr566A0A1B0GST0 319 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 SelenonD3Z2R5 557 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Arfip1G5E8V9 373 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r51L7N215 852 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sult2b1O35400 338 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Psmb10O35955 273 aa9.97□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cd9P40240 226 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms