RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ANKARQ7Z5J8 1434 aa20.55■□□□□ 0.88
PHGDH-223ENST00000641597 SSH3Q8TE77 659 aa20.54■□□□□ 0.88
PHGDH-223ENST00000641597 ORAI2Q96SN7 254 aa20.54■□□□□ 0.88
PHGDH-223ENST00000641597 ZNF530Q6P9A1 599 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-223ENST00000641597 CEMIPQ8WUJ3 1361 aa20.53■□□□□ 0.88
PHGDH-223ENST00000641597 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
PHGDH-223ENST00000641597 STAP2Q9UGK3 403 aa20.52■□□□□ 0.88
PHGDH-223ENST00000641597 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
PHGDH-223ENST00000641597 ZSCAN23Q3MJ62 389 aa20.51■□□□□ 0.87
PHGDH-223ENST00000641597 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
PHGDH-223ENST00000641597 PI4K2BQ8TCG2 481 aa20.51■□□□□ 0.87
PHGDH-223ENST00000641597 PXDNQ92626 1479 aa20.51■□□□□ 0.87
PHGDH-223ENST00000641597 DNAAF4Q8WXU2 420 aa20.5■□□□□ 0.87
PHGDH-223ENST00000641597 NASPP49321 788 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-223ENST00000641597 TEFQ10587 303 aa20.5■□□□□ 0.87
PHGDH-223ENST00000641597 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
PHGDH-223ENST00000641597 CWF19L2Q2TBE0 894 aaKnown RBP20.49■□□□□ 0.87
PHGDH-223ENST00000641597 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
PHGDH-223ENST00000641597 CWC22Q9HCG8 908 aaKnown RBP20.49■□□□□ 0.87
PHGDH-223ENST00000641597 PA2G4Q9UQ80 394 aaKnown RBP20.49■□□□□ 0.87
PHGDH-223ENST00000641597 ADCY9O60503 1353 aa20.49■□□□□ 0.87
PHGDH-223ENST00000641597 CPA1P15085 419 aa20.49■□□□□ 0.87
PHGDH-223ENST00000641597 POLA2Q14181 598 aa20.49■□□□□ 0.87
PHGDH-223ENST00000641597 AXIN2Q9Y2T1 843 aa20.49■□□□□ 0.87
PHGDH-223ENST00000641597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-223ENST00000641597 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
PHGDH-223ENST00000641597 NFAT5O94916 1531 aa20.48■□□□□ 0.87
PHGDH-223ENST00000641597 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
PHGDH-223ENST00000641597 ESPNB1AK53 854 aa20.47■□□□□ 0.87
PHGDH-223ENST00000641597 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
PHGDH-223ENST00000641597 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
PHGDH-223ENST00000641597 CACNA1FO60840 1977 aa20.47■□□□□ 0.87
PHGDH-223ENST00000641597 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
PHGDH-223ENST00000641597 TMEM63CQ9P1W3 806 aa20.47■□□□□ 0.87
PHGDH-223ENST00000641597 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
PHGDH-223ENST00000641597 ISY1Q9ULR0 285 aaKnown RBP20.46■□□□□ 0.87
PHGDH-223ENST00000641597 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
PHGDH-223ENST00000641597 GCP02774 474 aa20.45■□□□□ 0.86
PHGDH-223ENST00000641597 CLCN1P35523 988 aa20.45■□□□□ 0.86
PHGDH-223ENST00000641597 PTMSP20962 102 aa20.45■□□□□ 0.86
PHGDH-223ENST00000641597 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-223ENST00000641597 MCCP23508 829 aa20.44■□□□□ 0.86
PHGDH-223ENST00000641597 AIMP1Q12904 312 aaKnown RBP20.44■□□□□ 0.86
PHGDH-223ENST00000641597 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-223ENST00000641597 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
PHGDH-223ENST00000641597 SYCE3A1L190 88 aa20.44■□□□□ 0.86
PHGDH-223ENST00000641597 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
PHGDH-223ENST00000641597 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
PHGDH-223ENST00000641597 RNMTO43148 476 aaKnown RBP20.43■□□□□ 0.86
PHGDH-223ENST00000641597 HSPA4P34932 840 aa20.43■□□□□ 0.86
PHGDH-223ENST00000641597 AKAP4Q5JQC9 854 aa20.43■□□□□ 0.86
PHGDH-223ENST00000641597 NAP1L5Q96NT1 182 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-223ENST00000641597 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
PHGDH-223ENST00000641597 CUL4AQ13619 759 aa20.42■□□□□ 0.86
PHGDH-223ENST00000641597 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
PHGDH-223ENST00000641597 BRD1O95696 1058 aa20.42■□□□□ 0.86
PHGDH-223ENST00000641597 COL9A3Q14050 684 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-223ENST00000641597 ANKRD24Q8TF21 1146 aa20.42■□□□□ 0.86
PHGDH-223ENST00000641597 SGSM2O43147 1006 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 ZNF445P59923 1031 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 ZC3H6P61129 1189 aaKnown RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 C9orf78Q9NZ63 289 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 SNX14Q9Y5W7 946 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 GADD45BO75293 160 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 KLHDC4Q8TBB5 520 aa20.41■□□□□ 0.86
PHGDH-223ENST00000641597 JARID2Q92833 1246 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-223ENST00000641597 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
PHGDH-223ENST00000641597 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 C1orf141Q5JVX7 400 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 RNF214Q8ND24 703 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 LSG1Q9H089 658 aaKnown RBP20.4■□□□□ 0.86
PHGDH-223ENST00000641597 USP54Q70EL1 1684 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 ANAPC15P60006 121 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 PTH1RQ03431 593 aa20.4■□□□□ 0.86
PHGDH-223ENST00000641597 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-223ENST00000641597 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
PHGDH-223ENST00000641597 RAD50Q92878 1312 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 TCHHQ07283 1943 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 LARGE1O95461 756 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 KAZALD1Q96I82 304 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 SIL1Q9H173 461 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 AK2P54819 239 aa20.38■□□□□ 0.85
PHGDH-223ENST00000641597 ADCK5Q3MIX3 580 aa20.37■□□□□ 0.85
PHGDH-223ENST00000641597 AOX1Q06278 1338 aa20.37■□□□□ 0.85
PHGDH-223ENST00000641597 RUFY3Q7L099 469 aa20.37■□□□□ 0.85
PHGDH-223ENST00000641597 CNTROBQ8N137 903 aa20.37■□□□□ 0.85
PHGDH-223ENST00000641597 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
PHGDH-223ENST00000641597 TLR7Q9NYK1 1049 aaKnown RBP20.37■□□□□ 0.85
PHGDH-223ENST00000641597 MYL6BP14649 208 aa20.36■□□□□ 0.85
PHGDH-223ENST00000641597 PPP1R9BQ96SB3 815 aa20.36■□□□□ 0.85
PHGDH-223ENST00000641597 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
PHGDH-223ENST00000641597 MCM2P49736 904 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms