RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PLSCR1O15162 318 aa16.57■□□□□ 0.24
PHGDH-218ENST00000641491 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
PHGDH-218ENST00000641491 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
PHGDH-218ENST00000641491 ARXQ96QS3 562 aa16.57■□□□□ 0.24
PHGDH-218ENST00000641491 BTAF1O14981 1849 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
PHGDH-218ENST00000641491 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-218ENST00000641491 KIF16BQ96L93 1317 aa16.55■□□□□ 0.24
PHGDH-218ENST00000641491 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
PHGDH-218ENST00000641491 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
PHGDH-218ENST00000641491 VAMP4O75379 141 aa16.54■□□□□ 0.24
PHGDH-218ENST00000641491 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
PHGDH-218ENST00000641491 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
PHGDH-218ENST00000641491 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
PHGDH-218ENST00000641491 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
PHGDH-218ENST00000641491 MYL6BP14649 208 aa16.53■□□□□ 0.24
PHGDH-218ENST00000641491 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
PHGDH-218ENST00000641491 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
PHGDH-218ENST00000641491 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
PHGDH-218ENST00000641491 SBF2Q86WG5 1849 aa16.52■□□□□ 0.24
PHGDH-218ENST00000641491 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.24
PHGDH-218ENST00000641491 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
PHGDH-218ENST00000641491 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-218ENST00000641491 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
PHGDH-218ENST00000641491 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
PHGDH-218ENST00000641491 A0A087WZG4 1122 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 GNPATO15228 680 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 MS4A1P11836 297 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 CRKLP46109 303 aaKnown RBP16.51■□□□□ 0.23
PHGDH-218ENST00000641491 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
PHGDH-218ENST00000641491 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
PHGDH-218ENST00000641491 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-218ENST00000641491 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
PHGDH-218ENST00000641491 UTRNP46939 3433 aa16.51■□□□□ 0.23
PHGDH-218ENST00000641491 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
PHGDH-218ENST00000641491 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-218ENST00000641491 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-218ENST00000641491 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
PHGDH-218ENST00000641491 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
PHGDH-218ENST00000641491 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
PHGDH-218ENST00000641491 MSH5O43196 834 aa16.49■□□□□ 0.23
PHGDH-218ENST00000641491 NEFLP07196 543 aa16.49■□□□□ 0.23
PHGDH-218ENST00000641491 KCNQ4P56696 695 aa16.49■□□□□ 0.23
PHGDH-218ENST00000641491 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
PHGDH-218ENST00000641491 ITPK1Q13572 414 aa16.49■□□□□ 0.23
PHGDH-218ENST00000641491 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
PHGDH-218ENST00000641491 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
PHGDH-218ENST00000641491 A1BGP04217 495 aa16.48■□□□□ 0.23
PHGDH-218ENST00000641491 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-218ENST00000641491 PTGER2P43116 358 aa16.48■□□□□ 0.23
PHGDH-218ENST00000641491 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
PHGDH-218ENST00000641491 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
PHGDH-218ENST00000641491 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
PHGDH-218ENST00000641491 PTPRCP08575 1304 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 PHF14O94880 888 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 FLAD1Q8NFF5 587 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
PHGDH-218ENST00000641491 ZPR1O75312 459 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-218ENST00000641491 NEXNQ0ZGT2 675 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 FLIIQ13045 1269 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
PHGDH-218ENST00000641491 PDGFDQ9GZP0 370 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-218ENST00000641491 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
PHGDH-218ENST00000641491 BCAR3O75815 825 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 ANXA1P04083 346 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 ADRA2BP18089 450 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 RFC4P35249 363 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 TRAPPC3LQ5T215 181 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 PROM2Q8N271 834 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 XAGE3Q8WTP9 111 aa16.45■□□□□ 0.22
PHGDH-218ENST00000641491 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
PHGDH-218ENST00000641491 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-218ENST00000641491 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
PHGDH-218ENST00000641491 C5P01031 1676 aa16.44■□□□□ 0.22
PHGDH-218ENST00000641491 COL15A1P39059 1388 aa16.44■□□□□ 0.22
PHGDH-218ENST00000641491 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
PHGDH-218ENST00000641491 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
PHGDH-218ENST00000641491 LRRC4BQ9NT99 713 aa16.44■□□□□ 0.22
PHGDH-218ENST00000641491 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
PHGDH-218ENST00000641491 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
PHGDH-218ENST00000641491 LY75O60449 1722 aa16.43■□□□□ 0.22
PHGDH-218ENST00000641491 SSFA2P28290 1259 aa16.43■□□□□ 0.22
PHGDH-218ENST00000641491 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
PHGDH-218ENST00000641491 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-218ENST00000641491 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-218ENST00000641491 TJP1Q07157 1748 aa16.42■□□□□ 0.22
PHGDH-218ENST00000641491 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms