RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PDIA6Q15084 440 aa21.52■■□□□ 1.04
PHGDH-208ENST00000641023 MAP3K2Q9Y2U5 619 aa21.52■■□□□ 1.04
PHGDH-208ENST00000641023 ATP8B2P98198 1209 aa21.51■■□□□ 1.03
PHGDH-208ENST00000641023 LRRFIP2Q9Y608 721 aaKnown RBP21.51■■□□□ 1.03
PHGDH-208ENST00000641023 PHLPP1O60346 1717 aa21.51■■□□□ 1.03
PHGDH-208ENST00000641023 PIP4K2BP78356 416 aa21.51■■□□□ 1.03
PHGDH-208ENST00000641023 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
PHGDH-208ENST00000641023 ALDH1L1O75891 902 aa21.5■■□□□ 1.03
PHGDH-208ENST00000641023 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
PHGDH-208ENST00000641023 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
PHGDH-208ENST00000641023 COL16A1Q07092 1604 aaPredicted RBP21.49■■□□□ 1.03
PHGDH-208ENST00000641023 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
PHGDH-208ENST00000641023 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
PHGDH-208ENST00000641023 MYL6BP14649 208 aa21.48■■□□□ 1.03
PHGDH-208ENST00000641023 C5P01031 1676 aa21.48■■□□□ 1.03
PHGDH-208ENST00000641023 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
PHGDH-208ENST00000641023 HDAC5Q9UQL6 1122 aa21.48■■□□□ 1.03
PHGDH-208ENST00000641023 SHANK3Q9BYB0 1731 aa21.47■■□□□ 1.03
PHGDH-208ENST00000641023 SEC24BO95487 1268 aa21.47■■□□□ 1.03
PHGDH-208ENST00000641023 RIC3Q7Z5B4 369 aa21.47■■□□□ 1.03
PHGDH-208ENST00000641023 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
PHGDH-208ENST00000641023 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-208ENST00000641023 LINS1Q8NG48 757 aa21.46■■□□□ 1.03
PHGDH-208ENST00000641023 DISP2A7MBM2 1401 aa21.46■■□□□ 1.03
PHGDH-208ENST00000641023 TMOD3Q9NYL9 352 aa21.46■■□□□ 1.03
PHGDH-208ENST00000641023 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-208ENST00000641023 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
PHGDH-208ENST00000641023 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
PHGDH-208ENST00000641023 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
PHGDH-208ENST00000641023 APBB1O00213 710 aa21.44■■□□□ 1.02
PHGDH-208ENST00000641023 EXOC5O00471 708 aa21.44■■□□□ 1.02
PHGDH-208ENST00000641023 NEXNQ0ZGT2 675 aa21.44■■□□□ 1.02
PHGDH-208ENST00000641023 PLEKHM2Q8IWE5 1019 aa21.44■■□□□ 1.02
PHGDH-208ENST00000641023 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
PHGDH-208ENST00000641023 NOP58Q9Y2X3 529 aaKnown RBP21.44■■□□□ 1.02
PHGDH-208ENST00000641023 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
PHGDH-208ENST00000641023 SSH3Q8TE77 659 aa21.43■■□□□ 1.02
PHGDH-208ENST00000641023 CDCA7Q9BWT1 371 aaPredicted RBP21.43■■□□□ 1.02
PHGDH-208ENST00000641023 ANKRD13DQ6ZTN6 518 aa21.43■■□□□ 1.02
PHGDH-208ENST00000641023 EXOC6BQ9Y2D4 811 aa21.43■■□□□ 1.02
PHGDH-208ENST00000641023 CWF19L2Q2TBE0 894 aaKnown RBP21.42■■□□□ 1.02
PHGDH-208ENST00000641023 LRP10Q7Z4F1 713 aa21.42■■□□□ 1.02
PHGDH-208ENST00000641023 PPP1R42Q7Z4L9 355 aa21.42■■□□□ 1.02
PHGDH-208ENST00000641023 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
PHGDH-208ENST00000641023 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
PHGDH-208ENST00000641023 NUTM2BA6NNL0 878 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 NUTM2EB1AL46 878 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 SMARCA5O60264 1052 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 PTCD1O75127 700 aaKnown RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 NUTM2AQ8IVF1 878 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-208ENST00000641023 LRRCC1Q9C099 1032 aa21.41■■□□□ 1.02
PHGDH-208ENST00000641023 PLCH1Q4KWH8 1693 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 SRGAP3O43295 1099 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 METTL22Q9BUU2 404 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-208ENST00000641023 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-208ENST00000641023 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 TNS2Q63HR2 1409 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 GRM8O00222 908 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 POLA2Q14181 598 aa21.4■■□□□ 1.02
PHGDH-208ENST00000641023 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.02
PHGDH-208ENST00000641023 KCPQ6ZWJ8 1503 aa21.39■■□□□ 1.01
PHGDH-208ENST00000641023 GLI3P10071 1580 aa21.39■■□□□ 1.01
PHGDH-208ENST00000641023 PAPPAQ13219 1627 aa21.39■■□□□ 1.01
PHGDH-208ENST00000641023 SPATA31A1Q5TZJ5 1347 aa21.39■■□□□ 1.01
PHGDH-208ENST00000641023 PIP4K2AP48426 406 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-208ENST00000641023 UTYO14607 1347 aa21.38■■□□□ 1.01
PHGDH-208ENST00000641023 MTX1Q13505 466 aa21.38■■□□□ 1.01
PHGDH-208ENST00000641023 TTC22Q5TAA0 569 aa21.38■■□□□ 1.01
PHGDH-208ENST00000641023 PIGBQ92521 554 aa21.38■■□□□ 1.01
PHGDH-208ENST00000641023 RAB11FIP3O75154 756 aa21.37■■□□□ 1.01
PHGDH-208ENST00000641023 IGKV5-2P06315 115 aa21.37■■□□□ 1.01
PHGDH-208ENST00000641023 TOGARAM1Q9Y4F4 1720 aa21.37■■□□□ 1.01
PHGDH-208ENST00000641023 SURF6O75683 361 aaKnown RBP21.36■■□□□ 1.01
PHGDH-208ENST00000641023 PLBD2Q8NHP8 589 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 TBC1D32Q96NH3 1257 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 MYD88Q99836 296 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-208ENST00000641023 NEURL1BA8MQ27 555 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 MFAP1P55081 439 aaKnown RBP21.36■■□□□ 1.01
PHGDH-208ENST00000641023 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
PHGDH-208ENST00000641023 OTUD7AQ8TE49 926 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-208ENST00000641023 NBPF26B4DH59 902 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 GSPT1P15170 499 aaKnown RBP21.35■■□□□ 1.01
PHGDH-208ENST00000641023 NBPF14Q5TI25 921 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 NBPF10Q6P3W6 841 aaKnown RBP21.35■■□□□ 1.01
PHGDH-208ENST00000641023 NBPF15Q8N660 670 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 OSBPL3Q9H4L5 887 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-208ENST00000641023 GCKRQ14397 625 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 DDB1Q16531 1140 aa21.35■■□□□ 1.01
PHGDH-208ENST00000641023 EIF5BO60841 1220 aaKnown RBP21.34■■□□□ 1.01
PHGDH-208ENST00000641023 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
PHGDH-208ENST00000641023 A1BGP04217 495 aa21.33■■□□□ 1.01
PHGDH-208ENST00000641023 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
PHGDH-208ENST00000641023 NRAPQ86VF7 1730 aa21.33■■□□□ 1.01
PHGDH-208ENST00000641023 LRP6O75581 1613 aa21.33■■□□□ 1
PHGDH-208ENST00000641023 CDC45O75419 566 aa21.33■■□□□ 1
PHGDH-208ENST00000641023 PDE1AP54750 535 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms