RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 RGPD1P0DJD0 1748 aa20.05■□□□□ 0.8
HNRNPU-228ENST00000640306 ABTB2Q8N961 1025 aa20.04■□□□□ 0.8
HNRNPU-228ENST00000640306 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
HNRNPU-228ENST00000640306 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
HNRNPU-228ENST00000640306 DDX54Q8TDD1 881 aaKnown RBP20.04■□□□□ 0.8
HNRNPU-228ENST00000640306 PDLIM2Q96JY6 352 aa20.04■□□□□ 0.8
HNRNPU-228ENST00000640306 OFD1O75665 1012 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 CWC27Q6UX04 472 aaKnown RBP20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 STAP2Q9UGK3 403 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 SSH2Q76I76 1423 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 MBD3O95983 291 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 USP48Q86UV5 1035 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 RHPN1Q8TCX5 695 aa20.03■□□□□ 0.8
HNRNPU-228ENST00000640306 KCNQ3O43525 872 aa20.02■□□□□ 0.8
HNRNPU-228ENST00000640306 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.8
HNRNPU-228ENST00000640306 RRP9O43818 475 aaKnown RBP20.02■□□□□ 0.79
HNRNPU-228ENST00000640306 ANAPC15P60006 121 aa20.02■□□□□ 0.79
HNRNPU-228ENST00000640306 RASEFQ8IZ41 740 aa20.02■□□□□ 0.79
HNRNPU-228ENST00000640306 SRCIN1Q9C0H9 1055 aa20.02■□□□□ 0.79
HNRNPU-228ENST00000640306 LGR6Q9HBX8 967 aa20.02■□□□□ 0.79
HNRNPU-228ENST00000640306 PTMAP06454 111 aaKnown RBP20.01■□□□□ 0.79
HNRNPU-228ENST00000640306 CHPF2Q9P2E5 772 aa20.01■□□□□ 0.79
HNRNPU-228ENST00000640306 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
HNRNPU-228ENST00000640306 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
HNRNPU-228ENST00000640306 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
HNRNPU-228ENST00000640306 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
HNRNPU-228ENST00000640306 SSH3Q8TE77 659 aa20■□□□□ 0.79
HNRNPU-228ENST00000640306 PDZRN4Q6ZMN7 1036 aaPredicted RBP20■□□□□ 0.79
HNRNPU-228ENST00000640306 TSPY26PQ9H489 355 aa20■□□□□ 0.79
HNRNPU-228ENST00000640306 CNPY2Q9Y2B0 182 aa20■□□□□ 0.79
HNRNPU-228ENST00000640306 SETD1BQ9UPS6 1966 aaKnown RBP20■□□□□ 0.79
HNRNPU-228ENST00000640306 TPM2P07951 284 aa19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 HSPA4P34932 840 aa19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 PI4K2BQ8TCG2 481 aa19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 VSIG10Q8N0Z9 540 aa19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 SNX14Q9Y5W7 946 aa19.99■□□□□ 0.79
HNRNPU-228ENST00000640306 ARID3AQ99856 593 aa19.98■□□□□ 0.79
HNRNPU-228ENST00000640306 ZKSCAN5Q9Y2L8 839 aa19.98■□□□□ 0.79
HNRNPU-228ENST00000640306 HSPA2P54652 639 aa19.98■□□□□ 0.79
HNRNPU-228ENST00000640306 AK2P54819 239 aa19.98■□□□□ 0.79
HNRNPU-228ENST00000640306 NALCNQ8IZF0 1738 aa19.98■□□□□ 0.79
HNRNPU-228ENST00000640306 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 SGSM2O43147 1006 aa19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 ZNF830Q96NB3 372 aaPredicted RBP19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
HNRNPU-228ENST00000640306 TOPAZ1Q8N9V7 1692 aa19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 FIBPO43427 364 aa19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 RGPD8O14715 1765 aaPredicted RBP19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 LARGE1O95461 756 aa19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 PA2G4Q9UQ80 394 aaKnown RBP19.96■□□□□ 0.79
HNRNPU-228ENST00000640306 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 CASTP20810 708 aaKnown RBP19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 PLCB2Q00722 1185 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 KIF1BPQ96EK5 621 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 RAD50Q92878 1312 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 RUFY3Q7L099 469 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 CNTROBQ8N137 903 aa19.95■□□□□ 0.78
HNRNPU-228ENST00000640306 FMN2Q9NZ56 1722 aa19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 DNAAF4Q8WXU2 420 aa19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 SYAP1Q96A49 352 aaPredicted RBP19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 LSG1Q9H089 658 aaKnown RBP19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 RPAP1Q9BWH6 1393 aaPredicted RBP19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 USP25Q9UHP3 1055 aa19.94■□□□□ 0.78
HNRNPU-228ENST00000640306 POLA2Q14181 598 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 CCDC83Q8IWF9 413 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 LRRC59Q96AG4 307 aaKnown RBP19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 CCDC39Q9UFE4 941 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 TCHHQ07283 1943 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 ZNF500O60304 480 aaPredicted RBP19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 RAB11FIP3O75154 756 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 SYT1P21579 422 aa19.93■□□□□ 0.78
HNRNPU-228ENST00000640306 EIF4A1P60842 406 aaKnown RBP19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 PTH1RQ03431 593 aa19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 ADCK5Q3MIX3 580 aa19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 BEND3Q5T5X7 828 aa19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 DIAPH3Q9NSV4 1193 aa19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 SMC3Q9UQE7 1217 aa19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 FAM208AQ9UK61 1670 aaKnown RBP19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 HCLS1P14317 486 aaPredicted RBP19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
HNRNPU-228ENST00000640306 UQCRHLA0A096LP55 91 aa19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 STX6O43752 255 aa19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 UQCRHP07919 91 aa19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 PIK3C2AO00443 1686 aa19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 ZSCAN22P10073 491 aaPredicted RBP19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 JAKMIP1Q96N16 626 aaKnown RBP19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 TTC14Q96N46 770 aa19.91■□□□□ 0.78
HNRNPU-228ENST00000640306 PRAMEF22A3QJZ6 481 aa19.9■□□□□ 0.78
HNRNPU-228ENST00000640306 TEFQ10587 303 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms