RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 DCAF5Q96JK2 942 aa16.15■□□□□ 0.18
SPIN3-237ENST00000640187 FRAT2O75474 233 aaPredicted RBP16.15■□□□□ 0.18
SPIN3-237ENST00000640187 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
SPIN3-237ENST00000640187 PDIA6Q15084 440 aa16.15■□□□□ 0.18
SPIN3-237ENST00000640187 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
SPIN3-237ENST00000640187 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
SPIN3-237ENST00000640187 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
SPIN3-237ENST00000640187 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
SPIN3-237ENST00000640187 MYL6BP14649 208 aa16.14■□□□□ 0.17
SPIN3-237ENST00000640187 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
SPIN3-237ENST00000640187 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
SPIN3-237ENST00000640187 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
SPIN3-237ENST00000640187 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SPIN3-237ENST00000640187 COL5A2P05997 1499 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-237ENST00000640187 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 CABP4P57796 275 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 EVA1CP58658 441 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
SPIN3-237ENST00000640187 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
SPIN3-237ENST00000640187 DDX54Q8TDD1 881 aaKnown RBP16.12■□□□□ 0.17
SPIN3-237ENST00000640187 DDX21Q9NR30 783 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPIN3-237ENST00000640187 ABCC6O95255 1503 aa16.11■□□□□ 0.17
SPIN3-237ENST00000640187 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
SPIN3-237ENST00000640187 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
SPIN3-237ENST00000640187 SDSP20132 328 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 CARD10Q9BWT7 1032 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 LRRCC1Q9C099 1032 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
SPIN3-237ENST00000640187 IL2RBP14784 551 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-237ENST00000640187 C5P01031 1676 aa16.09■□□□□ 0.17
SPIN3-237ENST00000640187 SRGAP3O43295 1099 aa16.08■□□□□ 0.17
SPIN3-237ENST00000640187 COPS6Q7L5N1 327 aa16.08■□□□□ 0.17
SPIN3-237ENST00000640187 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.17
SPIN3-237ENST00000640187 CDC45O75419 566 aa16.08■□□□□ 0.16
SPIN3-237ENST00000640187 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
SPIN3-237ENST00000640187 PDE1AP54750 535 aa16.08■□□□□ 0.16
SPIN3-237ENST00000640187 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.16
SPIN3-237ENST00000640187 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
SPIN3-237ENST00000640187 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-237ENST00000640187 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
SPIN3-237ENST00000640187 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
SPIN3-237ENST00000640187 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
SPIN3-237ENST00000640187 POLA2Q14181 598 aa16.06■□□□□ 0.16
SPIN3-237ENST00000640187 BECN1Q14457 450 aa16.06■□□□□ 0.16
SPIN3-237ENST00000640187 LRP10Q7Z4F1 713 aa16.06■□□□□ 0.16
SPIN3-237ENST00000640187 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
SPIN3-237ENST00000640187 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
SPIN3-237ENST00000640187 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
SPIN3-237ENST00000640187 MRC1P22897 1456 aa16.05■□□□□ 0.16
SPIN3-237ENST00000640187 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
SPIN3-237ENST00000640187 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
SPIN3-237ENST00000640187 SLKQ9H2G2 1235 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-237ENST00000640187 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
SPIN3-237ENST00000640187 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
SPIN3-237ENST00000640187 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
SPIN3-237ENST00000640187 OSBPL3Q9H4L5 887 aa16.04■□□□□ 0.16
SPIN3-237ENST00000640187 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
SPIN3-237ENST00000640187 JARID2Q92833 1246 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-237ENST00000640187 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
SPIN3-237ENST00000640187 KIF2CQ99661 725 aa16.04■□□□□ 0.16
SPIN3-237ENST00000640187 MX1P20591 662 aa16.03■□□□□ 0.16
SPIN3-237ENST00000640187 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
SPIN3-237ENST00000640187 MYD88Q99836 296 aa16.03■□□□□ 0.16
SPIN3-237ENST00000640187 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
SPIN3-237ENST00000640187 GRM8O00222 908 aa16.02■□□□□ 0.16
SPIN3-237ENST00000640187 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-237ENST00000640187 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
SPIN3-237ENST00000640187 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
SPIN3-237ENST00000640187 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
SPIN3-237ENST00000640187 PA2G4Q9UQ80 394 aaKnown RBP16.02■□□□□ 0.16
SPIN3-237ENST00000640187 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.15
SPIN3-237ENST00000640187 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.15
SPIN3-237ENST00000640187 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
SPIN3-237ENST00000640187 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
SPIN3-237ENST00000640187 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
SPIN3-237ENST00000640187 NBPF15Q8N660 670 aa16.01■□□□□ 0.15
SPIN3-237ENST00000640187 BICC1Q9H694 974 aaKnown RBP16.01■□□□□ 0.15
SPIN3-237ENST00000640187 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
SPIN3-237ENST00000640187 A1BGP04217 495 aa16■□□□□ 0.15
SPIN3-237ENST00000640187 UNC5CLQ8IV45 518 aa16■□□□□ 0.15
SPIN3-237ENST00000640187 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
SPIN3-237ENST00000640187 ROBO1Q9Y6N7 1651 aa16■□□□□ 0.15
SPIN3-237ENST00000640187 ATP5J2-PTCD1G3V325 749 aa16■□□□□ 0.15
SPIN3-237ENST00000640187 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SPIN3-237ENST00000640187 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
SPIN3-237ENST00000640187 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
SPIN3-237ENST00000640187 MTX1Q13505 466 aa15.99■□□□□ 0.15
SPIN3-237ENST00000640187 GCKRQ14397 625 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms