RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ZNF76P36508 570 aa13□□□□□ -0.33
SCN1B-208ENST00000640135 DCAF5Q96JK2 942 aa13□□□□□ -0.33
SCN1B-208ENST00000640135 JAKMIP1Q96N16 626 aaKnown RBP13□□□□□ -0.33
SCN1B-208ENST00000640135 NLRP3Q96P20 1036 aa13□□□□□ -0.33
SCN1B-208ENST00000640135 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 GSTO1P78417 241 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 LARP1BQ659C4 914 aaKnown RBP12.99□□□□□ -0.33
SCN1B-208ENST00000640135 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
SCN1B-208ENST00000640135 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-208ENST00000640135 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
SCN1B-208ENST00000640135 MYO1BO43795 1136 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 POLD1P28340 1107 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
SCN1B-208ENST00000640135 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
SCN1B-208ENST00000640135 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 K7ELQ4 463 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-208ENST00000640135 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 MAP4K4O95819 1239 aaPredicted RBP12.98□□□□□ -0.33
SCN1B-208ENST00000640135 SYCP1Q15431 976 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 CCAR2Q8N163 923 aaKnown RBP12.98□□□□□ -0.33
SCN1B-208ENST00000640135 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 ECHDC1Q9NTX5 307 aa12.98□□□□□ -0.33
SCN1B-208ENST00000640135 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
SCN1B-208ENST00000640135 IP6K1Q92551 441 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCN1B-208ENST00000640135 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 BOLA2Q9H3K6 86 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 EHMT1Q9H9B1 1298 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 HLA-DOAP06340 250 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 TRAF1Q13077 416 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 EVI5LQ96CN4 794 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
SCN1B-208ENST00000640135 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
SCN1B-208ENST00000640135 F6X3S4 739 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
SCN1B-208ENST00000640135 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
SCN1B-208ENST00000640135 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 NAP1L1P55209 391 aaKnown RBP12.96□□□□□ -0.33
SCN1B-208ENST00000640135 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 HDAC9Q9UKV0 1011 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 CABP5Q9NP86 173 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 ZNF213O14771 459 aa12.96□□□□□ -0.33
SCN1B-208ENST00000640135 ATP7AQ04656 1500 aa12.96□□□□□ -0.34
SCN1B-208ENST00000640135 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
SCN1B-208ENST00000640135 ME1P48163 572 aa12.96□□□□□ -0.34
SCN1B-208ENST00000640135 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.34
SCN1B-208ENST00000640135 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.34
SCN1B-208ENST00000640135 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.34
SCN1B-208ENST00000640135 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-208ENST00000640135 STK3Q13188 491 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-208ENST00000640135 ABCC1P33527 1531 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC178Q5BJE1 867 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 PKNOX2Q96KN3 472 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 CFAP74Q9C0B2 1584 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 KDM4AO75164 1064 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 CUL5Q93034 780 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-208ENST00000640135 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 CCP110O43303 1012 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 ZFYP08048 801 aaPredicted RBP12.95□□□□□ -0.34
SCN1B-208ENST00000640135 PDE4BQ07343 736 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 RAB34Q9BZG1 259 aa12.95□□□□□ -0.34
SCN1B-208ENST00000640135 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
SCN1B-208ENST00000640135 ZNHIT6Q9NWK9 470 aaKnown RBP12.94□□□□□ -0.34
SCN1B-208ENST00000640135 ABCA8O94911 1581 aa12.94□□□□□ -0.34
SCN1B-208ENST00000640135 FIBPO43427 364 aa12.94□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
SCN1B-208ENST00000640135 TRIM27P14373 513 aa12.94□□□□□ -0.34
SCN1B-208ENST00000640135 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
SCN1B-208ENST00000640135 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
SCN1B-208ENST00000640135 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
SCN1B-208ENST00000640135 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 CDR1P51861 262 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
SCN1B-208ENST00000640135 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 KIF5BP33176 963 aa12.93□□□□□ -0.34
SCN1B-208ENST00000640135 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 COPS6Q7L5N1 327 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms