RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 NPHP3Q7Z494 1330 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 CSB-PGBD3P0DP91 1061 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
SPIN3-235ENST00000640104 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 STAP2Q9UGK3 403 aa16.38■□□□□ 0.21
SPIN3-235ENST00000640104 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
SPIN3-235ENST00000640104 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
SPIN3-235ENST00000640104 HSPA2P54652 639 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 NUTM1Q86Y26 1132 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
SPIN3-235ENST00000640104 MEGF6O75095 1541 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
SPIN3-235ENST00000640104 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
SPIN3-235ENST00000640104 TNPO1Q92973 898 aaKnown RBP16.36■□□□□ 0.21
SPIN3-235ENST00000640104 PHKG2P15735 406 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
SPIN3-235ENST00000640104 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
SPIN3-235ENST00000640104 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
SPIN3-235ENST00000640104 CHMLP26374 656 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
SPIN3-235ENST00000640104 COL18A1P39060 1754 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 AOX1Q06278 1338 aa16.34■□□□□ 0.21
SPIN3-235ENST00000640104 ALDH1L1O75891 902 aa16.33■□□□□ 0.21
SPIN3-235ENST00000640104 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.21
SPIN3-235ENST00000640104 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.21
SPIN3-235ENST00000640104 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
SPIN3-235ENST00000640104 ST18O60284 1047 aa16.32■□□□□ 0.2
SPIN3-235ENST00000640104 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
SPIN3-235ENST00000640104 TRAK2O60296 914 aa16.32■□□□□ 0.2
SPIN3-235ENST00000640104 PDIA6Q15084 440 aa16.32■□□□□ 0.2
SPIN3-235ENST00000640104 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
SPIN3-235ENST00000640104 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
SPIN3-235ENST00000640104 CRYBG1Q9Y4K1 1723 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 SCN11AQ9UI33 1791 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
SPIN3-235ENST00000640104 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-235ENST00000640104 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 GZF1Q9H116 711 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-235ENST00000640104 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■□□□□ 10.8
SPIN3-235ENST00000640104 BRPF3Q9ULD4 1205 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 MTX1Q13505 466 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
SPIN3-235ENST00000640104 MYL6BP14649 208 aa16.3■□□□□ 0.2
SPIN3-235ENST00000640104 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
SPIN3-235ENST00000640104 C5P01031 1676 aa16.3■□□□□ 0.2
SPIN3-235ENST00000640104 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
SPIN3-235ENST00000640104 CYP27B1O15528 508 aa16.29■□□□□ 0.2
SPIN3-235ENST00000640104 SSFA2P28290 1259 aa16.29■□□□□ 0.2
SPIN3-235ENST00000640104 IL27Q8NEV9 243 aa16.29■□□□□ 0.2
SPIN3-235ENST00000640104 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-235ENST00000640104 GRM8O00222 908 aa16.29■□□□□ 0.2
SPIN3-235ENST00000640104 ABCC6O95255 1503 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 MCCP23508 829 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 RIC3Q7Z5B4 369 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
SPIN3-235ENST00000640104 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 DCAF5Q96JK2 942 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 IL25Q9H293 177 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
SPIN3-235ENST00000640104 CPDO75976 1380 aa16.27■□□□□ 0.2
SPIN3-235ENST00000640104 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
SPIN3-235ENST00000640104 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.2
SPIN3-235ENST00000640104 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
SPIN3-235ENST00000640104 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 NEK4P51957 841 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
SPIN3-235ENST00000640104 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 MRC1P22897 1456 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-235ENST00000640104 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
SPIN3-235ENST00000640104 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 ARXQ96QS3 562 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 BICC1Q9H694 974 aaKnown RBP16.26■□□□□ 0.19
SPIN3-235ENST00000640104 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
SPIN3-235ENST00000640104 UTYO14607 1347 aa16.25■□□□□ 0.19
SPIN3-235ENST00000640104 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
SPIN3-235ENST00000640104 ZGPATQ8N5A5 531 aaKnown RBP16.25■□□□□ 0.19
SPIN3-235ENST00000640104 XIRP1Q702N8 1843 aaKnown RBP16.25■□□□□ 0.19
SPIN3-235ENST00000640104 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
SPIN3-235ENST00000640104 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
SPIN3-235ENST00000640104 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms